KEGG   Penaeus chinensis (fleshy prawn): 125046073
Entry
125046073         CDS       T08118                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125046073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125046073
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125046073
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH zf-RING_13
Other DBs
NCBI-GeneID: 125046073
NCBI-ProteinID: XP_047499652
LinkDB
Position
38:2076035..2089380
AA seq 740 aa
MDSDEDLARKLQAQFDEEERIARKQENEDAIFAQNLASQSHDMSESDEDVVEVNRNEEVP
VRELVDLDSDVEDAEKEEGSSLQMIGSMSKTVPQHTISDDETDIEDIEAESNATEKLQNS
PSKESSPKKAAVPEHTLSDDETDIEDLESPTEVPNKPDSDSTVTEKQTDSLTKKRSEHSV
SDDDTDMEELVVRAEVPEPPKTETENEKELSASGSQSTPLRKDGSMEQANSSKKRPVCKF
GADCYRKNPWHLEEFYHPHLEDKDGAGAKRKSESSNSISEPAEKRRRESDSGSSARKGSF
SNKNMPFPARLAASSPFNFFVNKSYSVKETHEDPLSLVFPDLLNPKLGEIVESVQLNFMV
DLEFLMTNYKAGKIESKPLLVMYGQMEGNPKDYPAVTCTKVNLPFQYGTHHTKMMIFEYT
DSLRVVIHTANLVPSDWYEKTQGYWISPAFPLLEEGKAGLLDGESPTRFKRDLVDYLTSY
KAPDLTRWSHIIKKYDFTSCNAVFVGSSPGYHAGEHKDKWGHMKARRAIRQHGGSWTSSV
PIIAQCSSIGSLGKDAKSWLSGELGMSLTGAPGVCASAPKVNVIYPSEDDVCNSSEGWMG
GSCLPYNSGTHAKQTWLTECMHCWRSDRRKRTRVMPHIKTYTRLNKSQSAAQFFLLTSAN
ISKAAWGTLQKQNTQLFIRSYEAGILLLPKFLTDTSEIPLSAKDLSLPYDVPLTPYPSGA
IPWFMNTNKTRPDVFGRTYP
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggattccgatgaggatttggcaagaaagctgcaagctcagtttgatgaagaggaaaga
atagcaaggaagcaagaaaatgaagatgcaatctttgcccagaacttagcatcacagtca
catgatatgtctgagagtgatgaggatgtggtggaagtgaacaggaatgaggaagtgcca
gtgcgggaattagtagatttagacagtgatgttgaagatgctgaaaaagaagaagggtct
tccttgcagatgatcggttcaatgtccaagaccgttcctcagcacaccatatcagacgat
gaaacagacattgaggatatcgaagctgaatctaatgctacagagaagctacaaaattct
ccaagtaaagagtcttcaccaaagaaagcagcggtacctgagcacaccttatcagatgat
gaaacagatatagaagacttggaatcaccgactgaagtgccaaataagcccgactcagat
tcaacagttacagagaagcaaacagattcattaacaaagaagaggtcggagcacagcgtt
tctgatgatgatactgatatggaggaattagttgtccgagctgaagtgcccgaaccccct
aagacagagacagagaatgagaaggaactgtcagcgtcaggcagccagtcgactcccttg
aggaaagatggatccatggaacaggcaaattcttcaaagaaaagacctgtatgcaaattt
ggtgctgattgttatcgcaagaatccgtggcacttggaggagttttaccacccacactta
gaggacaaggatggtgctggagctaagaggaagtcagaatcatcaaacagcatttcagag
ccggcagaaaaacgtagaagggaatcagattcagggagctctgcgaggaagggttcattt
tctaacaaaaacatgcccttcccagctcgcctagcagccagcagccctttcaactttttt
gtgaacaagagttacagcgtaaaggagactcatgaagacccactgagccttgtctttcct
gacctcctcaatccgaagctgggggaaattgttgaatctgtacagcttaatttcatggtg
gatttagaattcctgatgaccaattataaggctgggaaaatagagagcaaacctctgctt
gtgatgtatggccagatggagggcaaccccaaggactacccagctgtaacatgcacaaag
gtaaacctacctttccagtatggaactcaccacaccaagatgatgatattcgagtacaca
gacagcttgcgggtagtcatccacacggccaacctcgtacccagtgactggtatgagaag
actcaaggctactggatatcgcctgcttttcctctgctggaggaaggaaaggcagggttg
ttggatggagaatcgccaacacgcttcaaacgcgatttggtggactacctcacttcatac
aaagccccagatcttacaagatggtcacacatcattaagaaatatgactttaccagctgc
aatgcggtgttcgtgggcagcagtccaggctaccacgcgggagaacacaaggacaagtgg
ggtcacatgaaagcgcgcagggccattcggcagcatggcggttcttggacctcttctgtg
cccatcattgctcagtgttcgtctatagggagtttggggaaagacgccaagtcctggctt
agtggagagctagggatgagcttgacaggagcgcctggtgtctgtgcaagcgctccgaag
gtgaatgtgatctacccgagcgaagatgacgtgtgcaacagcagtgaaggttggatgggg
ggttcatgtctcccttataactctgggacgcacgccaaacagacctggcttaccgagtgt
atgcactgttggcgcagtgacaggagaaaaagaacacgagtcatgccacatatcaagacc
tacacccgcttgaacaagagccagtctgctgcgcaatttttcctcctaacctcagccaac
atctcaaaagctgcctggggtacactccagaagcagaacacgcagttgtttattagatca
tacgaagctggaatcttacttctacctaagttccttaccgacacatccgaaatcccatta
agtgctaaggacctttcactgccttacgacgttccactgactccctacccaagcggtgcg
atcccctggttcatgaacacaaacaagacccggccggacgtctttggccgaacttaccct
tga

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