Penaeus chinensis (fleshy prawn): 125046705
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Entry
125046705 CDS
T08118
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125046705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125046705
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125046705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_17
TPR_8
TPR_12
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_7
ARM_TT21_C
TPR_20
NatA_aux_su
Coatomer_E
NRDE-2
Motif
Other DBs
NCBI-GeneID:
125046705
NCBI-ProteinID:
XP_047500545
LinkDB
All DBs
Position
39:complement(15997676..16020193)
Genome browser
AA seq
1336 aa
AA seq
DB search
MAEIKQALKEAKKAMKENNFEEVSKQCKIALKHDRKNYNALVLFGRACQELGKLGDSKKA
LMMATQVDSESPVAWQGLAVLCDKQADITTHEETITIYTRLKDIVKDDNEKLDSIYRKIA
TVYLEKEEPLSAAATLRELVTRLTETAKITEGWRSIAQILSGIKDLPEEEAPKLEVALEH
LLNESVLGENESNYQSYLRILYRLRKFPKLIVAAQNMLNIFPTYYPLEWICRIFVEMNAF
PKEGEDKFPLSQEELSEYNLKLLTMNKASPWGNLAMGLTCKLENKLEEAKAYLRVGADRV
SNDLLGWRLLLIVQEKNNDWPGVEVSCKKIINILKTGSKVAIPDGEDAESYSIKMHLMQA
KALFYMGHMNHLKQAVTILDELAGTDLESGILLVRSRIRLKEFNEAMDEIERLQSAHGKQ
PRLKLLLAILHRSRGENQEALQLLMEYVEEEPSVGEGQLEMGRLYFEMGDLKKAQICCMR
AGKLDPTLGQAFLYLGHFFRRQDNMPKALKCYEKALSINPCDDDTGAALSDMYRILGEHD
ANIRLLRRVTSEAGRASCAWAWLRLGLHHLALHEYDKAIQAFHCTLTINPNDSASYECLG
DAYLAYGAHTAALKVFTKASEINPNALYPLYQIAHIKQMVGENLEAIADYEAVLERDPIP
AVQVVSLVDLAEALIANARKSYKQFFHKNVKDDCVRAIPHLMRAASIKPESSSIWKLLGD
ACSLLFPIPPSLGTFTVPAKLMDREVEDLQKMVEVDKLQVLQLGARCYAVALQIASNDAS
LWHDLAVNTYLQGHLMQQEKGADEAAVKSLMERSLAALRKSLALEPTNGKIWNSLGLVAS
HKVVGELKLAQHALIKSTEYQPTAVNWTHLGAFYLVHEEPRLAHEAFSVAQALDPSFVTC
WVGQALVAEAVGHYEAFDLFRHTTMLGIQVESCMGYTHHVSQLACDVTNEKKSRVQEAVK
QALPKVSDCMVYYTTEEERDPVGLNMAGLMLEMIGLYQSAARAYEMALTALSESDEVDRK
FLDGVHCNLGRTLTAQGLVEEAMQQYSAIKEPDYFTQCGLALASLKAGKFEEAYNAYTAA
LHWLAPDDTQKSHILVALASLQYKFQNCEEAKKLLFQGSQLKGASVPGLFALAALGLITG
DAVLTGAALAELRPYEHNPEYVHHVTFLKAAEATARSNMKEAKLILSKAIHQHPASAPLW
QSLARHLLTMVTTSAASSQSHCVAAAACAASATKLAQAAGQHKTIAQDSVASVLATLGSE
GSKINQSRASLRKAQRAVLMCPGSAEAWTMLVAARVAAGHAQRHQDVVRLAEMWAQQAPP
KVAKWLNGISRQYKVA
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcaaacaggccctgaaagaggccaaaaaggctatgaaagagaacaatttt
gaagaagttagtaaacagtgtaagattgccttaaagcacgacagaaaaaactacaatgcg
ctggtcctctttggtcgggcgtgccaggagctggggaagttgggagattcaaaaaaggct
cttatgatggcaacacaggtggattcggagagcccagtggcatggcagggtctggcagtc
ctttgtgataaacaggcagatattaccactcatgaagagactatcacaatatacacaaga
ttaaaggacattgttaaggatgataacgagaaactggacagcatttaccgcaagattgcc
acagtatatcttgagaaagaggaacccttatcagctgctgcaacgctcagggaactggtg
actcggctcactgaaaccgccaagatcacggaaggctggcgtagcatcgcgcaaattctt
tctggcataaaggatctccccgaagaagaggctccaaagctagaggtagcattagagcat
ctcttgaatgaatctgttttgggagaaaatgagagtaactaccagagctacctgcgaata
ttgtatcgcctaaggaaattcccaaagttgattgtggctgcgcagaatatgctgaatata
tttccaacatattatccactggagtggatatgtcgtatatttgtggagatgaatgctttc
ccaaaagaaggcgaagacaaatttcctctgagccaagaggaactgtcggaatataatttg
aaactcttaactatgaacaaggcctcaccatggggtaatttggcaatggggctgacctgc
aaacttgagaacaagctggaagaagccaaagcatacctcagagttggtgctgaccgtgtc
tcaaacgacttacttgggtggaggctgctcctgattgtacaagagaagaacaatgattgg
ccaggtgtagaagtgtcttgtaagaaaataatcaacatcttgaagacagggtccaaagtt
gccattcctgacggtgaagatgctgagtcttactcaataaaaatgcacctcatgcaggca
aaggcattgttttacatgggtcatatgaatcacctgaagcaagcagtaaccattttagat
gagttggctggcacagatctggagagtggaatcttgctggtgaggagcagaatcaggctg
aaggagtttaatgaagccatggatgagatagagaggctgcagtctgctcatggtaaacaa
ccacgactcaagctccttttagccatactgcacaggtctcgtggggagaaccaagaggca
ttacaattgctcatggaatatgttgaggaagagccatctgtaggagaaggtcagttggag
atgggccgtttgtattttgaaatgggagacttgaagaaagcccagatctgctgcatgaga
gctggaaagttggatcctactcttggtcaagcattcctctatctgggccatttcttcaga
cgtcaggataatatgccaaaagctctgaagtgttatgaaaaggctctctccattaatccc
tgtgatgatgacactggagctgctttgtcagacatgtacaggattttgggagagcatgat
gctaatattcgccttctccgccgtgtcacaagtgaagctggtcgtgcatcatgtgcttgg
gcctggcttaggttagggctccaccatcttgctttgcatgagtatgacaaagcaattcag
gcattccactgcacactgacaatcaatccaaatgacagtgccagctatgagtgtctgggt
gatgcctacttggcctatggtgcccacactgctgccctgaaagtgttcacaaaggcatca
gagattaacccgaatgctctctacccactctaccagattgcccacataaaacagatggtt
ggagagaacttggaagccatagcagattatgaagcagtattggaacgtgaccccattcca
gctgtgcaggtcgtgtccctggtggatttggctgaggctctgatagcaaatgcccgcaag
tcatataagcaatttttccacaaaaatgtgaaagatgactgtgtgcgagcaattccacat
cttatgagggcagcaagcataaaaccagagagttcgtccatttggaagctgttgggagat
gcatgcagcctcctcttccccatccctccttcccttggcaccttcactgttcctgctaag
ctgatggacagagaggtagaggaccttcagaagatggtggaggtggacaaactccaggtc
ctgcagttgggtgccaggtgctatgctgtggcccttcagatcgccagcaatgatgccagt
ctgtggcacgaccttgcagtgaacacataccttcaggggcatctgatgcagcaggaaaag
ggggcagatgaagcagctgtcaagagtttaatggaacgctcactggcagctcttaggaag
agtctggcacttgagccaaccaatgggaagatttggaattcccttggtcttgttgcttcg
cacaaagttgtaggagagctgaaactagcacagcatgcgctgattaaatcaacagaatac
cagccaacagctgtgaattggactcatctaggagctttttatttagtccacgaagagcca
cgacttgctcatgaagctttctctgttgcgcaggctctcgatccatccttcgtcacatgt
tgggttggccaggcacttgtggctgaggctgtgggccactatgaagcgtttgatctcttc
cggcacaccacaatgctgggcatccaggttgagagttgtatggggtatacccatcatgtt
agccagcttgcttgtgatgttaccaatgaaaagaaatcaagggtgcaggaggctgtgaag
caggctcttcctaaagtatcagactgtatggtgtattatactacggaagaggagcgagat
ccagtgggtttgaacatggcaggactgatgctggagatgattggtctctaccagtctgct
gccagggcctatgagatggctcttacagcactgtcagaatcagacgaggttgatagaaag
tttttggatggtgtccactgcaatctgggaagaacacttactgcacaaggcttggtggag
gaagccatgcagcagtacagcgccattaaagaaccagactacttcactcagtgtggctta
gctctggccagtttaaaagcgggcaaatttgaggaggcctacaatgcatacacagcagcc
ctccactggctggccccagacgacacgcagaaatctcacatccttgtggctttggcttcc
ctgcagtacaagttccagaactgtgaggaggcgaaaaaactcctcttccaaggatcccag
ttgaaaggtgcatcagtgcctgggttgtttgctctagcagctctgggactaattactgga
gatgcagttcttacgggggcagctttagctgaactgaggccctatgagcacaacccagaa
tatgtccatcatgtcaccttcctcaaagcagctgaagccactgcacgaagtaacatgaag
gaagccaagttaatcctgagcaaagccattcaccagcacccagccagtgctcccttgtgg
cagtcactggctcgtcaccttctcaccatggttaccacatccgcagccagtagccagagc
cactgtgtggcagctgctgcctgcgctgcctctgcaaccaagctagcacaggcagctggc
cagcataagaccattgcacaggattcagtggcaagtgtcctagctacattaggttctgaa
ggatctaagataaaccaaagtcgtgctagtcttcggaaagctcaaagggcagtcctcatg
tgtccaggatcagctgaggcttggacaatgctggtggctgctagggtggctgcaggccat
gcacaaagacaccaggatgttgttcggttggcagagatgtgggctcagcaggcaccacca
aaagtggcaaagtggttgaatggcatctcaaggcagtataaggttgcatga
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integrated database retrieval system
