KEGG   Pseudomonas chlororaphis subsp. piscium: C4K32_1164
Entry
C4K32_1164        CDS       T09060                                 
Name
(GenBank) Signal recognition particle protein Ffh
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pchp  Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02024  Quorum sensing
pchp03060  Protein export
pchp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pchp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C4K32_1164
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4K32_1164
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4K32_1164
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pchp02044]
    C4K32_1164
Enzymes [BR:pchp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C4K32_1164
Secretion system [BR:pchp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C4K32_1164
  Eukaryotic Sec-SRP protein
   C4K32_1164
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 YqeC APS_kinase AAA_33 AAA_16 AAA_24 AAA_31 KTI12 ParA cobW nSTAND3 ABC_tran Thymidylate_kin 6PF2K AAA_30 SLFN-g3_helicase AAA_14 Mg_chelatase AAA_19 AAA_5 AAA_18 NACHT AAA_17 Mur_ligase_M
Other DBs
NCBI-ProteinID: AZC67845
LinkDB
Position
1263920..1265296
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDLSQKPVAIAEAAIKEAK
LKFIDVVIVDTAGRLHIDADMMDEIQALHAVVKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEQTLDKEKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKI
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctaaccgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaacatcaaagacaccctgcgcgaagtgcgcatggcgttgctcgaa
gccgacgttgccctgccggtggtcaaggacttcgtcaactcggtgaaggaacgtgccgtc
ggcactgaagtgtcgcgcagcctgaccccgggccaggcgttcgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgcggccaacgaagacctgaacctgagcgccgtaccgcct
gccgtcgtgctgatggccggtttgcagggcgccggtaagaccaccaccgccggcaagctc
gcgcgcttccttaaagagcgcaagaagaagagcgtgatggtggtgtccgccgacgtttac
cgtccggcggcgatcaagcagctcgaaaccctggccaacgacattggcgtgaccttcttc
ccgtccgacctgagccagaagccggtcgcgatcgccgaagcggctattaaggaagccaag
ctcaagttcatcgacgtggtcatcgtcgacaccgccggtcgtctgcacatcgacgccgac
atgatggacgagatccaggcgttgcacgcggtggtcaagccggtggaaaccctgttcgtg
gtcgacgcgatgaccggccaggacgccgccaacacggccaaggcctttggcgacgcactg
ccgctgaccggcgtgatcctgaccaaggtcgacggcgatgcccgtggcggtgccgcgctg
tcggtgcgtgcgatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgagccgttccaccctgagcgtatcgcttcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagaccctcgacaaggaaaaagccgacaagctggcc
aagaagctgaaaaaaggcaaaggcttcgacctcgaagacttccgcgatcagctgcaacag
atgaagaacatgggcggcctcggtggcctgatggacaagctgccgaatatcggtggcgtg
aacctggcgcaaatgggcaatgcccaaggcgcggccgagaagcagttcaagcagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaaacgccggatcgccatgggctccggcacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgccaagggcggaatggcg
aaaatgatgcgcggcatgggcggaatgttgcccggcggcggcatgccgaagatctga

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