Proteus terrae subsp. cibarius: F9282_00020
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Entry
F9282_00020 CDS
T06330
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pcib
Proteus terrae subsp. cibarius
Brite
KEGG Orthology (KO) [BR:
pcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcib03032
]
F9282_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pcib03400
]
F9282_00020 (gyrB)
Enzymes [BR:
pcib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F9282_00020 (gyrB)
DNA replication proteins [BR:
pcib03032
]
Prokaryotic type
DNA Topoisomerases
F9282_00020 (gyrB)
DNA repair and recombination proteins [BR:
pcib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F9282_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QGW01481
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All DBs
Position
3630..6044
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGFCDEII
VTIHSDNSVSVRDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIHRDGKIHQQIYRHGVPDDRLKVMGDTEKSGTFVRFWPSLETFKGET
EFQYDILAKRLRELSFLNSGVSIRLIDKRDNREDHFHYEGGIKAFVEYLSRNKTPIHQNV
FYFSTEKDGIGVEVGMLWNDGFQENVYCFTNNIPQRDGGTHLVGFRTAMTRTLNNYMDKE
GYNKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCSERDPAFSEL
YLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKVKKG
KQEQYIKDDDAMDEYLMSIALDGAALYVSEHAPAMHGEQLEKLVVDYHAAHKIIRRMERI
YPLSMLNSLVYHSTLTEDALSDKAKVEEWMSGLVNRLNEAEEQGSTYSYTIVQNDENRLF
EPVLRIRTYGVDTDYKLDYDFIHSSEYQRITHLGDIIGNLIEEGAFIERGERRQPISSFE
EALEWLTKESRRGLAVQRYKGLGEMNPEQLWETTMNPDTRRMMQVTVKDAIATDELFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacatatgactcctcaagtatcaaagtattaaaagggctggatgcggtgcgt
aagcgcccggggatgtatatcggggatacagatgatggaaccggtctgcatcacatggtc
ttcgaggtggtcgacaacgcaatcgacgaagccctcgcgggtttctgtgatgagataatt
gtcactatccattcagataactccgtctctgttcgagatgatggtcgtggaattccaacc
ggcattcacccagaagagggggtctcagcggcagaggttattatgaccgttctgcatgca
gggggtaaattcgatgataactcctataaagtctctggtggacttcatggtgtaggggtt
tctgttgttaatgcgttgtctgaaaaactcgaactgacaatccatcgtgatggaaaaatc
catcagcaaatttatcgtcacggtgtgcctgatgatcgcttaaaagtgatgggcgatact
gaaaaatcagggacatttgttcgcttctggccaagtcttgaaacctttaaaggtgaaaca
gaattccagtatgacattttagcaaaacgtcttcgcgagttgtcattcttgaactcaggc
gtttctatccgtttaattgataaacgtgataaccgtgaagatcatttccactatgaaggc
ggtattaaagcattcgttgaatacttaagccgtaataaaacgccaattcaccaaaatgta
ttctatttctctactgaaaaagatggtattggtgttgaagtgggaatgctgtggaatgat
ggtttccaagaaaatgtttattgctttaccaacaatattccacaacgtgatggtggtaca
cacttagttggtttccgtactgcaatgacgcgtacattaaacaactatatggataaagaa
gggtataataagaaatcgaaaatcagtgcaacgggtgatgatgctcgtgaaggcttgatt
gcggttgtttctgttaaagtacccgatcctaaattctcatcacaaacaaaagataaactg
gtttcttcagaagtgaaaacagcggtagaaacgctgatgaatgagaagctggtggaatat
ctgttagaaaatccaaacgacgcgaaaattgttgttggtaaaatcattgacgccgctcgt
gctcgtgaagcagcgcgtaaagcacgtgagatgacacgtcgtaaaggcgcattagattta
ggtggtttaccgggtaaattagcggactgttctgaacgtgatcctgctttctctgaactg
tatttagtggaaggggactctgcggggggctctgcaaaacaagggcggaaccgtaagaca
caggctattcttccgttaaaaggtaaaatcttaaacgttgagaaagcgcgctttgataaa
atgttggcttctcaagaagttgcaacgttaattacagcattaggttgtggtatcggtcgt
gatgaatataatccagataaactgcgttatcacagcattatcatcatgacggatgcggac
gtcgatggttctcacattcgtactctgttactgacattcttctatcgtcaaatgccagaa
attatcgaacgcggtcatatctttattgctcagccaccactttacaaagtgaagaaaggt
aaacaagagcaatacatcaaagatgacgacgcaatggacgaatatctgatgtcgatcgcg
cttgatggagcagcactttatgtgagtgaacacgcaccagcaatgcatggtgagcaactt
gaaaaactggttgttgattaccatgcagcgcacaagattattcgtcgtatggagcgtatc
tatccacttagcatgttaaacagcttggtatatcactcaacgctaacagaagatgcgtta
tccgataaagctaaagttgaagagtggatgagtggcttagttaaccgtctaaatgaagcg
gaagagcaaggcagtacttatagctacactatcgttcaaaacgatgaaaatcgtctgttt
gagcctgtgttacgtattcgtacttatggtgtggatacagactacaaactggattatgac
tttatccacagtagcgaatatcaacgtattactcatttaggtgatattatcggtaaccta
attgaagagggtgcgtttattgagcgtggagagcgtcgtcagccaatttcaagctttgaa
gaagcacttgaatggttaacaaaagaatcacgtcgtggccttgctgtacagcgttataaa
ggtcttggtgaaatgaacccagagcaattatgggaaaccaccatgaatccagatacacgc
cgtatgatgcaagttaccgtgaaagatgcgattgcaaccgatgaattatttaccacctta
atgggtgatgcggttgaacctcgtcgtgcctttatcgaagagaatgcgctgaaagctgca
aatatcgatatctag
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