Prosopis cineraria: 129295441
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Entry
129295441 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129295441
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129295441
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Ortholog
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129295441
NCBI-ProteinID:
XP_054789935
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All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MGKIMTESAARVTLLLMATLAITVPCLVDANIGDFDDYLREKAKQARRVALEAYEPNPLK
VTSELNMHVHLAMNEAKNSSRGRDLSEKRHKGPCLTTNPIDRCWRCDKDWEKNRFKLAEC
AMGFGRKTTGGLGGKIYVVTDSSDVDVANPKPGTLRYAAIQKEPLWIIFAHSMVIKLKQE
LLVNSDKTIDGRGANIHIKSGGGLTLQFVKNVIIHNLRIRNIKAKKGGLVRDAPDHVGLR
TRSDGDAISIFGSTNVWIDHISMSNXDDGLVDAIMGSTAITISNCHMTRHNDVMLFGAGD
VYQQDRVMQVTVAFNHFGNGLIQRMPRCRHGWFHVVNNDYHNWIMYAIGGTANPTILSQG
NRFSAPNNEAAKQVTNRVSAPESAWKNWRWQTEHDEFVNGAFFVPSGTPITESKFDKE
NT seq
1255 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagataatgacagaaagtgcagctagagttacgttattgttaatggccacattg
gccattactgttccatgcctcgtcgacgctaacattggagattttgacgattatctccga
gaaaaagctaagcaggcccggagagtggctcttgaagcatacgaacctaaccctttgaag
gtcacgtcagagctcaatatgcatgtccatctggcgatgaatgaggccaaaaacagcagt
agagggagggacttgagcgagaagagacacaaaggaccgtgcttgaccaccaacccaatc
gatcgatgctggagatgcgacaaagactgggagaagaatcgctttaagctagccgaatgt
gccatgggtttcggccgcaagaccaccggcgggttgggcggtaagatctatgtcgtcaca
gattcttccgacgtcgatgtagctaacccgaaaccgggaactctgaggtacgcggcgatc
cagaaggagccattgtggatcatatttgcgcacagcatggtgattaagctgaaacaggag
ttgctggtgaattccgacaagacaatcgatggacgaggagccaatattcacataaaaagc
ggtggcggcctcaccctgcaattcgtgaagaacgtcatcatccacaatcttcgcattcgc
aatatcaaagcaaagaagggaggtctggtgagggatgctccggaccatgtcgggttgaga
accagaagcgatggcgatgccatcagcatcttcggatccaccaacgtctggatcgatcac
atctcgatgtccaacngcgacgacgggctagtcgacgccatcatgggttccaccgccatt
accatatcaaattgccacatgacgagacacaacgatgtgatgctgtttggagcaggagac
gtgtatcaacaggacagggtgatgcaggtaacggtggcgttcaaccactttgggaacgga
ttgatacagaggatgccgaggtgcagacatgggtggttccacgtggtgaacaacgactac
cataactggataatgtacgccatcggaggaacggcgaatccgaccatactcagccaagga
aaccggttcagtgctccgaacaacgaagcagcgaagcaggttacaaacagagtgagtgcg
ccggaatcggcgtggaaaaactggcggtggcagacggagcatgacgagtttgtgaacgga
gctttttttgtaccgtcgggaacacctataactgaatctaaattcgacaaagagg
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