Prosopis cineraria: 129320469
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Entry
129320469 CDS
T09047
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129320469
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129320469
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129320469
NCBI-ProteinID:
XP_054821911
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MITSSLSLLFLLSFLLSITLISSRPLQDPELVVQEVNRKINASTARRNLGYLSCGTGNPI
DDCWRCDPDWENNRQRLADCAIGFGKNAVGGKGGQIYVVTDSGDDDPVNPKPGTLRYGAI
QDEPLWITFARDMVIQLKEELIMNSFKTIDGRGAIVHIAGGPCITIQYVTNIIIHGIHIH
DCKQGGNAMVRDSPKHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI
TISNNYMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFAAPDDRFSKEVTKHEDAEESEWKNWNWRSEGDLMVNG
AFFTASGAGASSSYARASSLSARPSSLVGSITGGAGTLDCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtcttccctctctctgctcttcttgctctcctttcttctctccataaccctc
atttcctccagacccctccaagacccagagttggtagtacaagaagtgaacaggaagatc
aatgcttccacggctcggaggaacttggggtacctctcgtgtggtacaggtaaccccatt
gacgattgctggagatgtgaccccgactgggagaataacaggcagaggctggccgattgt
gctattgggttcgggaagaatgctgtcgggggtaagggtggtcagatttacgtggtaacg
gactccggcgacgacgaccccgtcaacccgaagccggggacactccggtacggcgcgatc
caagacgagccgttgtggatcacattcgcgagggacatggtgatacagctgaaagaagag
cttataatgaactcgttcaagaccatcgacggtagaggcgcgatcgtgcatattgcgggc
ggtccgtgcattacaatccagtacgtgaccaacattataatccacgggattcacatccat
gactgcaagcagggcgggaacgccatggtgagggactccccaaagcactacgggtggaga
acagtatcggacggtgacggggtgtccatcttcggagggagccacgtgtgggtggaccat
tgctccctgtcgaattgcaacgacgggttgatcgatgcgattcatgggtccaccgcgatc
accatctccaacaattacatgactcaccatgacaaggtcatgttattgggtcacagtgac
tcctacacggaagacaagaacatgcaggtcaccatagcctttaatcacttcggagaaggg
ctcgttcaaagaatgccaagatgcaggcatggatatttccatgtggtgaacaatgactac
acccattgggaaatgtacgccattggtggaagtgctaacccaaccatcaacagccagggc
aacagatttgcagcacccgatgatagattcagcaaagaggtgacgaagcacgaggatgcg
gaagagagcgagtggaagaactggaactggaggtcggaaggggacttgatggtaaacggt
gcgtttttcacggcgtcgggagctggagcgtcgtcaagctatgcgagggcgtcgagtttg
agtgcgaggccctcttcgctggtgggttcgataaccggaggtgccggtacccttgactgt
agaaaaggctctcgttgctga
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