Candidatus Pantoea carbekii US: BMSBPS_0515
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Entry
BMSBPS_0515 CDS
T03853
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
pck
Candidatus Pantoea carbekii US
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pck03016
]
BMSBPS_0515
03036 Chromosome and associated proteins [BR:
pck03036
]
BMSBPS_0515
Transfer RNA biogenesis [BR:
pck03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BMSBPS_0515
Prokaryotic type
BMSBPS_0515
Chromosome and associated proteins [BR:
pck03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BMSBPS_0515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
HI0933_like
FAD_binding_2
AlaDh_PNT_C
DAO
Pyr_redox
Thi4
Motif
Other DBs
NCBI-ProteinID:
AKC32306
UniProt:
U3U5A8
LinkDB
All DBs
Position
complement(718794..720677)
Genome browser
AA seq
627 aa
AA seq
DB search
MFFSNPFDVIIIGAGHAGTEAALAAARMGRKTLLLTYNINTIGQMSCNPAIGGIGKGHLV
KEIDALGGKMAQAIDQAGIQFRVLNSSKGAAVRATRAQADRNLYRQAMRTFLEHQPNLII
LQQEVIDLIIRNHHVCGVITDIGVKFFSKTVILTVGTFLNGKIHIGLDTYSAGRTGEPAS
LALAKCLHSLLPSPTKRLKTGTPPRIDAKSVNFNILCSQHGDIPVPIFSFIGDISQHPKQ
IPCWITHTNEKTHNIILENLHLSPMYNGAIKGLGPRYCPSIEDKVIRFSERNKHQIFLEP
EGLNSNEIYPNGISTSLPLDVQIKIVRSITGLENANIIRSGYAIEYDFFDPRNLQKTLES
KVIHGLFFAGQINGTTGYEEAAAQGLLAGLNAACQSLDQEGWMPRRDQAYIGVLIDDLCT
LGTEEPYRMFTSRAEYRLMLREDNADLRLTEIGRKLGLIDEVRWVRYNKKLELIEKERQR
LRNIWVNPQSSYVEEVNKILRTPLTKEVNGEDLLLRPEMNYRLLTSLNKYSPAIVDKEVA
EQVEIQVKYQGYITLQQKEIERQKKNEETILPINFNYNDIAGLSHEVIAKLNIHKPTSIG
QASRIAGITPAAISILLIHIKKTLAIA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttcaaatccttttgacgttattataattggtgctgggcatgcaggtacagag
gctgcactggctgctgctcggatgggccgtaaaacattactgttaacttataatattaat
acaattggacaaatgtcttgtaatccagcaattggaggcatcggtaaaggacatttagta
aaagaaatagatgccttaggtggaaaaatggcacaagctattgatcaagctggtattcaa
tttagagttctaaattctagtaaaggagcagcagtacgtgctactcgtgctcaagctgat
cgcaatttgtaccgtcaagctatgcgcacatttttagaacatcagccaaatttaatcata
ctacagcaagaagtaatcgatttgattatacgtaatcatcatgtttgtggcgttatcact
gatataggagtaaaatttttttctaaaacagttattcttacggtaggtacttttttaaac
ggtaagattcatattggtttagatacttatagcgctggacgtacaggcgaaccggcatcg
cttgctttagctaaatgtttacattcattattgccatctcctacaaaacgtttgaaaact
ggtactcctccgcgtattgatgcaaaaagcgttaattttaatattctctgttcacagcat
ggagatataccagtaccaatcttctcatttataggagatatatcgcaacaccctaagcaa
ataccgtgttggatcacgcatactaatgagaaaacacacaatattatccttgaaaatctt
catcttagcccaatgtataacggtgcaattaaaggtctaggtccacgttattgtccttca
attgaagataaagtaatacgatttagtgagcgcaataaacatcaaatttttcttgaacct
gaaggtttaaatagcaatgaaatttatccaaatggaatttccactagtctaccattggat
gtgcaaataaaaattgttaggtcaataacaggattagaaaatgcaaatattattcgatcg
ggttatgctatagaatatgatttttttgatccgcgtaatctgcagaaaacgttagaaagc
aaagttattcacggtttattttttgcagggcaaatcaatggaactacaggttacgaagag
gctgctgctcaaggtttattagccggacttaatgctgcatgccagtctttggaccaagaa
ggttggatgccacgacgtgatcaagcttacattggagttcttattgatgacttatgtaca
ttaggtaccgaagaaccttaccgcatgttcacttcacgtgctgaatatcgtttgatgctc
cgtgaagataatgcagatttgcgtctaactgaaatagggcgaaaactaggattgatagat
gaagtacgttgggtgcgttataacaaaaaattagaattgattgaaaaagaacgtcagcgt
ctgcgtaacatatgggtaaatccgcaatcaagttatgtagaagaagtgaacaagatactt
agaacgccattgacaaaagaagtaaatggtgaagatctattattacgtcctgaaatgaac
tataggttattaacttccctaaacaagtacagtccagctattgtagataaagaagtagca
gaacaggttgaaattcaagtgaaataccaaggatatattacacttcagcaaaaagaaatt
gaacgtcaaaaaaaaaatgaagagactatactgccaattaattttaattacaatgacatc
gcaggactgtcgcatgaagtaattgcaaaacttaatattcataaaccaacttcaattggt
caggcgtcccgtattgccggtattacacctgccgcgatttctattttattaatacatatt
aaaaaaactttagcgattgcatga
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