Procambarus clarkii (red swamp crayfish): 123753942
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Entry
123753942 CDS
T07930
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03030
DNA replication
pcla03410
Base excision repair
pcla03420
Nucleotide excision repair
pcla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123753942 (RfC4)
03410 Base excision repair
123753942 (RfC4)
03420 Nucleotide excision repair
123753942 (RfC4)
03430 Mismatch repair
123753942 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcla03032
]
123753942 (RfC4)
03036 Chromosome and associated proteins [BR:
pcla03036
]
123753942 (RfC4)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123753942 (RfC4)
DNA replication proteins [BR:
pcla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123753942 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
123753942 (RfC4)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123753942 (RfC4)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123753942 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
123753942 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_lid_RFC1
AAA_22
AAA_16
nSTAND_NTPase5
RCF1-5-like_lid
Rad17
Viral_helicase1
nSTAND3
Mg_chelatase
AAA_11
RuvB_N
AAA_5
AAA_18
AAA_19
AAA_assoc_2
MipZ
AAA_24
NTPase_1
MeaB
AAA_28
AAA_23
ABC_tran
RNA_helicase
RsgA_GTPase
AAA_25
ATPase_2
AAA_3
IstB_IS21
CbiA
AAA_30
Motif
Other DBs
NCBI-GeneID:
123753942
NCBI-ProteinID:
XP_045591900
LinkDB
All DBs
Position
6:33045209..33102212
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AA seq
347 aa
AA seq
DB search
MAAEGSRMEVDARENLNKAAAAADKAAHAPWIEKYRPTTFPEIVGNEETVARLEVFAKQG
NVPNIIIAGPPGVGKTTTILCLARALLGPSFREAVMELNASNDRGIDVVRNKIKMFAQQK
VTLPKGKHKIIILDEADSMTDGAQQALRRTMELYSNTTRFALACNSSEKIIEPIQSRCAM
LRYSKLTDSQILTKILEVCRKEDLSYTEDGLEAIVFTSQGDMRQGLNNLQSTAQGFGHVS
SENVFKVCDEPHPILIKEMILHCVKTNFDEAYKILAHLWKLGYASEDIISNIFRVCKNTN
MAEFLKLEFIKEIGYTHLRIVQGTSSLLQLSGLLARLCSKSLEPLKI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaggcagcaggatggaggtggatgctcgtgagaacttgaataaggcagct
gctgcagctgacaaagctgcccatgcaccatggattgaaaaatatcgtccaacaactttt
cctgagattgtaggaaatgaagagactgttgcaagactggaggtgtttgccaagcaaggc
aatgttcccaacattattattgcaggacctcccggtgttggcaagacaactacgattttg
tgcttagctcgtgcacttttgggtcctagttttcgagaagctgtgatggaactgaatgca
tcaaatgaccgtggtattgatgttgtgcgaaataagataaagatgtttgctcagcaaaaa
gtaacacttcccaaaggaaagcataaaattattattctggatgaagctgacagtatgact
gatggtgctcaacaagcactaagaagaactatggagctgtattccaataccactagattt
gcgttagcatgtaattcttcagaaaaaattattgaaccaatccagtcacgatgtgcaatg
ctgagatactcgaagctcaccgactctcagattcttacaaaaattttggaagtatgtaga
aaggaggatttgagttacactgaagatggtcttgaagcaattgtgttcacttcacaagga
gatatgcggcaaggtctcaacaacctacagtccacagcacagggctttggacacgtatca
tcagagaatgtgttcaaggtgtgtgatgagccccatccaattttaatcaaagaaatgatt
ctacactgtgtgaaaacaaactttgatgaggcttataagattttagctcatctgtggaaa
ttgggctatgcttctgaggacataattagcaacatcttcagagtttgcaagaacaccaac
atggcagaatttctcaagttagaatttatcaaggaaataggttacacccatctacgtatt
gttcagggaacctcctcacttcttcagttgtcggggctcttggccagactgtgctcaaag
tctctcgagcctctgaaaatataa
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