Procambarus clarkii (red swamp crayfish): 123756732
Help
Entry
123756732 CDS
T07930
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123756732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123756732
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
123756732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_11
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_7
TPR_9
TPR_6
TPR_MalT
ANAPC3
ARM_TT21_C
TPR_Slam
NatA_aux_su
ARM_TT21
DUF6584
HAT_PRP39_N
TPR_15
ARM_TT21_N
DUF5588
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
123756732
NCBI-ProteinID:
XP_045595970
LinkDB
All DBs
Position
26:complement(7545819..7578789)
Genome browser
AA seq
1336 aa
AA seq
DB search
MAEAKSALKEAKKAMKENDFEAVSKYCKIALKHDRKNYNALLLFGRACQELGKLEDSKKA
LMMATQVDPESPVAWQGLAVLCEKQPGITNRDESITIYTRLTDIVKNDDEKVDNVFRKLA
TLQLEKEEPVSAAVTLRILANRLTDKNKVKEAWRSITHILSGVKDLPEEHAPKLQEALEN
ILNESVLGENEGNYQTYLRLLYRTKQATKLVTAAQKMAEIFPTYYPLEWICRMYVEMTAT
ASEEGEFPLNREEISKYVLKLLSLNKASPWGNLAQGICYEQDNQHIEAKAHLRVGAERVG
NNLLGWKILLNVQEATNDWSGVEVTCKRSLKIMEEDPNVTIPDNEEFEAYRTKLLLMQAK
AFVYMGHKNHLRQAVALLEKYACTSLDCGLLLVKSRIKLQEFDFAEDELIQLEDVFGQHF
QLKLLSACLLRAQGQKQKALRLLEELVQEQPDCAEAHLELGRVYFELGDLKKAQICCMRA
GKLDSKLGQAFMYLGHFFRRQDVMDKALKCYEKALSLNPCDDEIGASLSDMYRVLGKYEA
NIHLLHRITSEGGRASCGWAWLRLGLHHLALHNYDQSIQAFQCTLKINPDDSATYECLGD
AYLARGAHSAALKVFTYASQLNPGALYPLYQIAHIKQIVGENLEAINDYEAVLKREPIKP
VEVVSLIGLAEALIAIARKYYEQFFHANVKDACLRAIVALMKAARIKPESSCIWKLMGDA
CTLLHPVPVSLSRFRVPAKLVNREVKDLDQMLLVDKLEILQLGARCYGVALQITDDAALW
HDLGVNTYLQGKILETGKEGESDAAIKDLMERSLMALRKSLSMDPLNGMTWNSLGIVAAH
KMAGEYALAQHALIKACQCQPSAVTWTHLGAFYLTQGEAHLAHEAFSQAQALDPSFVTCW
VGQALVAESVGHSEAFDLFRHTTLLGIQLESCIGFTHHVTDMACDSKKQSNVRTQQVIKQ
STPSSTDCMVFYSREREEDVVGLNMTGLMLEMMGLYQSAIKAYETALRIVRQNEAESVER
IDGIRCNLGRALTALGNVEEAMVQFKAIKNPDYFTQCGLALASLKAGQFEDAYNGYTAAL
HWLAPDDTQKSHILVALASLQYKFQNTDEAKKLLFQGSQLKGASVHGLLALAALGLISGD
AVLTSAAMAELKPYEHHKDHLHHVAFLRAAGATARGNTKEAKSILSRTVHQHPSSAPLWR
SLARHLLTTSSTSSKNASGQCRAAATCASAATKLAQTAGENTTIAQDAVTSVMATLGFDA
SIRRNSQNKTSLRQAQRAVLMCPGSPEAWAMLMAAQLVSGHAQTVAHLGPLAKILSQEGS
SQISTWLQTVSSKMIK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccaagagtgcattgaaggaggccaagaaggctatgaaggaaaatgacttc
gaggcagttagtaaatattgtaagattgctcttaaacacgatcgcaagaattacaatgcc
ctgttattgttcggtcgtgcatgccaagagttgggcaaactggaggactctaaaaaagca
ctcatgatggcaacacaggtagaccctgaaagtcctgtggcctggcagggactcgctgtg
ctctgtgagaaacaaccgggcatcacaaatcgagatgagagcattacaatatataccaga
cttactgacattgtcaaaaatgatgacgagaaagtagacaacgtttttcgaaaattagca
acactgcagttagaaaaagaagagcctgttagtgctgcagtcactctgcggatacttgcc
aaccgattaacggacaaaaacaaagtcaaagaagcctggcggagcatcacacacattctc
tctggagtcaaggacttgcctgaagagcatgcaccaaagctacaagaagcattggagaac
atcttaaatgagtcagtcttgggagaaaatgaagggaattatcagacatatctgcgactc
ttgtatcgcacaaaacaagcaacaaagcttgttacagcagcacagaaaatggctgaaata
tttcccacatattatcctctggaatggatctgccgtatgtatgttgagatgacagcaact
gcaagcgaagagggagagttcccactgaacagagaagaaatcagcaagtacgtactcaaa
ctactaagcctgaacaaggcatctccatggggcaacctagcacaagggatttgttatgaa
caagataaccagcacattgaggccaaggctcatttaagagtcggtgctgaacgagttgga
aataatctccttggatggaaaatactattaaatgtccaagaagcaactaatgattggtca
ggtgttgaagtaacttgcaagaggtcgctcaaaataatggaagaggatccgaatgtcaca
ataccagataacgaagagtttgaggcatatcggacaaagttgctactaatgcaagctaag
gcttttgtgtacatgggacacaaaaatcacctacgacaggcagttgctctcctggagaag
tatgcatgcacaagtttagactgtggactgctgctagtcaaatcaagaataaaattgcaa
gaatttgacttcgcagaagatgagcttatacagcttgaggatgtctttggacaacatttt
caattgaagcttctctcagcatgtcttcttcgagctcaagggcagaagcagaaggcattg
agactcttggaagagcttgttcaagagcagcctgactgtgcagaagctcatctggaattg
ggtcgtgtgtattttgaattaggagacctcaagaaagctcaaatatgttgcatgagggct
gggaaactggattcaaagcttggacaagcttttatgtatttgggtcatttcttccgccgc
caggatgtcatggacaaagctctcaaatgctacgagaaagctttatctctaaacccatgt
gatgatgaaattggagcatcgctatcggacatgtacagagtacttgggaaatatgaagca
aacattcatctgttgcaccgaattacgagtgaaggtgggcgtgcttcctgtgggtgggcg
tggctcagactcggactccatcatcttgctttacataactatgatcagtctattcaggcc
tttcagtgcaccctcaaaattaatcctgatgacagtgcaacctacgagtgcctcggagat
gcatacttggctcgcggtgctcactcagcagctctcaaggtgttcacgtatgcgtcacaa
ctgaatcctggggctctctatcctctgtaccagattgctcacatcaagcagatagttggg
gagaacctggaggcaataaacgattatgaagctgtgctgaagcgtgagcctataaaacct
gtggaagttgtgtctctgatcgggctcgccgaagctcttatagcaattgctcggaaatat
tatgagcagtttttccatgcaaatgtgaaggatgcatgcctccgtgccattgttgcttta
atgaaggctgccagaataaagccagagagctcgtgcatttggaagttgatgggcgatgct
tgtactctgcttcatcctgtgccagtctcgctttccaggtttagggttcctgcaaagttg
gttaacagggaagttaaagatttagatcaaatgcttctggtggataaactggagatactg
cagttgggtgccaggtgctatggagtggcccttcaaataacagatgatgcagcactctgg
catgatttaggagtcaatacttatttgcaagggaagatcttggaaacaggaaaagaaggg
gaaagcgatgcagccattaaggacttgatggaacgctctcttatggctctaagaaaaagc
ctctctatggatcctttaaatggaatgacttggaattctcttggcattgttgctgcccac
aaaatggcgggtgagtatgctctagctcagcacgctctgatcaaagcgtgccagtgccag
cccagtgcagttacatggactcacctgggtgctttttacctaactcagggggaggctcat
ctagctcatgaagccttttcccaagcacaggctttagatccttcctttgttacttgctgg
gttggacaggcccttgttgctgagagtgtgggccattctgaagcatttgatctcttccgt
catacaaccttgcttggcattcaattagaaagttgtataggcttcactcatcatgtaacg
gacatggcatgtgattccaagaagcaaagtaatgtgcgtactcagcaggttattaagcag
tcaaccccaagttcaactgactgtatggttttctattctcgagaaagagaggaagatgtt
gtggggctgaacatgacgggcttgatgctggagatgatgggactgtaccagtcggcgatc
aaggcttatgaaacggcactacgcattgttcgacagaatgaggcagaatcagtggagcgt
attgatggtatacgctgcaaccttggcagagctttaacagcattggggaacgtagaagag
gctatggttcaatttaaggctattaagaatccagattatttcactcagtgtggcctagca
cttgcaagtttgaaagcgggccaatttgaagatgcatacaatggctacactgctgccctt
cactggctagctcctgatgatactcaaaagtcacatatcctagtggctttggcatctctc
cagtacaagtttcaaaatactgatgaagctaagaagctgcttttccaagggtcacagttg
aaaggagcatcagtacatggactcctggctctagcagctctgggtctcatttctggtgat
gcagtgctcacaagtgcagccatggctgaacttaaaccatatgaacatcacaaagatcac
cttcatcatgtggctttcttgagagctgcaggagctactgcacggggaaacacaaaagaa
gcaaagtcaatcttgagtcgtactgtccaccagcacccatctagtgctccactatggagg
tcattggcccgccacctcctgaccacttcatcaacatctagcaagaacgccagtggccag
tgtagagcagcagccacttgtgcgtctgctgcaaccaaacttgcccagacagcaggagaa
aacacaaccattgctcaggatgctgtaacaagtgtgatggctaccctcggatttgatgca
agcattcgaagaaattcccaaaacaagacaagtttaagacaagctcagcgagcagtgctt
atgtgccctggttctcccgaggcatgggcgatgctcatggcagcacagcttgtttctggc
cacgctcagactgtagcacatcttggtccgctggccaaaattttgtctcaagaaggatct
tctcagatatctacatggctacaaactgtgtcgtcaaagatgatcaagtga
DBGET
integrated database retrieval system
