Procambarus clarkii (red swamp crayfish): 123760082
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Entry
123760082 CDS
T07930
Symbol
Top3beta
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03440
Homologous recombination
pcla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123760082 (Top3beta)
03460 Fanconi anemia pathway
123760082 (Top3beta)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcla03032
]
123760082 (Top3beta)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123760082 (Top3beta)
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123760082 (Top3beta)
DNA replication proteins [BR:
pcla03032
]
Eukaryotic type
DNA Topoisomerases
123760082 (Top3beta)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
123760082 (Top3beta)
FA (Fanconi anemia) pathway
123760082 (Top3beta)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF6980
DUF1420
Motif
Other DBs
NCBI-GeneID:
123760082
NCBI-ProteinID:
XP_045601496
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Position
16:12204228..12271560
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AA seq
854 aa
AA seq
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MKTVFMVAEKPSLAQSLAEILSNRKNTTRKGFNGACSVHEWSGSFLNQSVRFKMTSVCGH
VMSLDFPGKFNNWDRVDPAELFRCPTEKKEATPKLRMPEFISKESRGCDYLVLWLDCDKE
GENICFEVIACVENSMPRPTFREQTIFRAKFSAITERDIKAAMNALVEPNENESRSVDAR
QELDLRIGCAFTRFQTKFFQGKYGNLDSSLISFGPCQTPTLGFCVERHDFIQSFKPETYW
VLQVKVAVTEEKQLSLDWERVRSFDKDVANLFLNIVKEQKRAKVLKVEMKEKAKPRPLAL
NTVELMRVASSGLGMGPHHAMTLAERLYTQGYISYPRTETTHYPENFDLKGALRIQEGHS
DWGSIVRDILKEGIQRPKKGHDVGDHPPITPMRCADRSQLDHDSWRLYEYITKHFIGTLM
TDCIYLSTTISLSIGSENFSISGKQLIDPGFTKVMDWLALQDEEKLPDLKPGDDLPIIEA
KLSERQTSPPDYLTESELISLMEKHGIGTDASIPVHINNISQRNYVQVATGRKLVPTSLG
IVLVHGYQKIDPDLVLPTMRSAVEEQLNLIALGKADFDSVLTHTLEIFQLKFQYFVKNIE
GMDELFEVTFSPLSASGRPLSRCGKCRRYIKLVETKPVRLHCVTCDETFAVPQNGVIREF
QENRCPLDDFQLLVWSGGAKGKSFTFCPYCYNNPPFPDMSKGSGCNLCSHPTCQYGRDNV
GVSQCMECPTGILVMDPSSGPKWKLACNRCDVIINLFDKASKVQVLEDTCEDCGSQTVTV
EYKEGKSKLRDGQLTTSGCIFCSATLIPLVEKHRASQDGGRGRGRGRGRGRGGSRGGRGS
SRGGRGRGGGRGRR
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtctttatggtggctgagaagccctccctggcacagtctctcgcagagatt
ctcagcaacaggaagaacaccaccaggaaaggttttaatggagcttgtagtgttcatgaa
tggtcaggctccttcctcaatcagtctgtccgcttcaagatgacatctgtgtgcgggcat
gtgatgtcattagacttcccaggaaaatttaataattgggacagagttgatcctgctgaa
ttgttcagatgtccaaccgagaagaaagaagcaacacccaagcttcgaatgccagagttt
ataagcaaagaatcccgagggtgtgactacctagtactgtggctcgattgtgataaagag
ggagaaaacatttgttttgaggtcattgcctgtgttgaaaattctatgcctaggccaaca
ttcagagaacagacaatcttccgtgccaagttttctgcaatcacagagcgggacattaaa
gctgctatgaatgcccttgtagaacctaatgaaaatgaatcaagatcagttgatgccaga
caggagctggatcttcgtattggatgtgcctttactagattccaaactaagtttttccag
ggaaagtatggcaaccttgactcatcactcatatcatttggaccttgccagactccaact
ttaggattctgtgtggaacggcatgatttcatccagtcattcaagcccgagacatactgg
gtactgcaggtaaaagtagcagtaactgaagaaaaacagttgtcattagattgggagaga
gttcgaagctttgacaaagatgtggcaaatttgtttctcaatatagtgaaagaacagaag
cgtgccaaggtgttgaaagtcgaaatgaaagagaaggcaaaacctcgccctcttgcactg
aacactgtggaactgatgcgagtggccagctcaggtcttggaatgggacctcatcatgcc
atgaccctggctgagagactgtacacgcaaggatatatctcgtatccacgtacagaaaca
acgcattacccagaaaattttgatctcaagggagctttgagaattcaggaaggtcacagt
gactggggcagtattgtcagagacattctaaaagaaggcattcagaggccaaagaaaggt
cacgatgtaggcgaccatcctcctattaccccaatgcgttgtgcagacagaagtcagttg
gaccatgactcatggcgtttgtatgagtatattaccaagcattttatcggtacactaatg
actgactgtatatacctgagtacaaccatcagtctttctatagggtcagaaaacttcagc
atatctgggaaacagctaatagatcctggcttcactaaggtgatggactggctagcattg
caagatgaggagaaattacctgaccttaaacctggagatgatttacctatcattgaggca
aagctcagtgaacgacaaacatctcctccagattacttgactgaatcagaattgattagc
ctgatggaaaaacatggtattggtacagatgcctcaatccctgtacacattaacaatatt
tcccaaagaaattatgttcaagtggcaacaggacgtaagttggtgccgaccagcttgggc
attgtcttggttcatggctatcaaaagattgatcctgatttggtgctgccaactatgaga
agtgcagtggaagagcaacttaatctaattgctcttggaaaagcagactttgattctgtc
ttgacccatacattggagatatttcagctcaagttccagtactttgtcaagaacatagaa
ggaatggatgagctgtttgaagtgacattttcacctctctctgctagtgggagaccactg
tcaagatgtggtaaatgtcgacgttacatcaagttggtggagactaaacctgtccgtctc
cactgtgtgacgtgtgatgaaacttttgctgtgcctcagaatggtgttatacgagagttt
caggagaacaggtgtcctttagatgacttccagctcttggtgtggtctggtggagctaaa
gggaagagttttaccttctgcccttactgctacaacaaccctcctttcccggacatgtcc
aaaggaagtggatgcaacctttgttctcacccgacctgccagtatggccgagacaatgtg
ggtgtatcccagtgcatggaatgtccaactgggatattggttatggatccctcatctgga
cccaagtggaaactggcttgtaatagatgtgacgtcataataaacctcttcgacaaagcc
agcaaggttcaggttcttgaagatacctgtgaggattgtggctctcaaacagtcactgtt
gaatacaaggagggaaagagtaaactgagagacggacagttgacaacaagtggatgtata
ttctgcagtgccactctaatacccctggtggaaaaacacagagcttcccaagatgggggt
cgtggcagaggacgagggagagggagaggaaggggaggaagcaggggagggagagggagc
agccgtggtggacgaggtcgtggtggtggcagaggaagaagatag
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