Procambarus clarkii (red swamp crayfish): 123773929
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Entry
123773929 CDS
T07930
Name
(RefSeq) transient receptor potential-gamma protein-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcla04040
]
123773929
Ion channels [BR:
pcla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123773929
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
123773929
NCBI-ProteinID:
XP_069174753
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All DBs
Position
91:3263746..3460896
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AA seq
1168 aa
AA seq
DB search
MDEGDEDAAGTEPRPDTMGGDVGGDVESGRGGGVGGGGGLLAPQPHQPLRSNLLALSTAD
AANKDAKNKNIKSHSIHGMGEEDRHNRPHQEMGQLTIEEKKFLLSVERGDVAGVRRMLLR
SRESGCMMNINCVDPLGRSALLMAIDNENLEMVELLIEFKVETKDALLHAISEEYVEAVE
VLLDHEETVHIPGEPHSWEAIPPETATFTPDITPLILAAHRDNYEIIKILLDRGATLPGP
HDLRCGCDECVTSRLEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLS
FMEHEFRSEYQELRKQCQDFATALLDHTRSSYELEVLLNHDPTGPPHEHGERMHLNRLKL
AIKLKQKKFVAHPNVQQLLASIWYEGLPGFRRKNMALQALQIVKIGILFPIFSVVYILAP
HTTPGQTMRKPFIKFICHSASYLTFLCLLILASQRIETVIVDWFGATPTLKKWVATDVTT
RRGAPPSLVEWLILAWVFGLIWSEIKQLWDVGLREYVGDMWNVIDFITNALYVATIALRI
VAYYQVQREIRENLSTENLPRQEWDTWDPMLIAEGLFAAANIFSSLKLVYIFSVNPYLGP
LQVSLSRMVVDILKFIFLYLLTLFAFSCGMNQLLWFYADLEKQTCDELGLNPEGEDETGP
KIDSCIVWRRFSNLFETTQTLFWAAFGLIDLTNFELTGIKPFTRFWGMLMFGTYSVINVI
VLLNLLIAMMNHSYQLVSVSSERADTEWKFARSKLWISFFEEGGTCPPPFNIIPTPKSLY
YLFHWFYKKFCGQTKAAKKEHMRTIRRKARQASERELRYQNIMRNLVRRYVTVEQRKAEN
QGVTEDDVNEIKQDISAFRCELVEILKNSGMNTSTATSTGQGILPRGSTGGKKNRQKERR
LMKGFNLGVNSISSNLSLGTSTVLPPTVEVAEVAVKRSPQNKLARLARLAEARLGRPTNK
KRWGTLVEAAKNAKVKKLLSRSRSDESLSSDPGNEMNGDSEDARGGTDTPTPLQSLPPGI
LRGGDGSSEGTRRERSGSRGSGTMHLDAAALVSQHETTKRPPKNSVSFDQSALAGASSSS
PSHSSTETEPPPPYPQWPRPVPTASNLTETNPTATSPSSGGSGSLPPLAVSESSEPLVSG
GPPANGSVQPPRLPGIQPVNRHMAAGWL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggtgacgaggacgcggcgggaaccgaaccccggccggacacaatgggcgga
gatgttgggggagatgttgagtctgggaggggtggaggggttggaggaggggggggtctg
ctagccccacaaccccaccaacctctccgctccaacctcctagccctctccaccgccgac
gccgccaacaaagacgccaagaacaagaacattaagagccacagcatccatggcatggga
gaggaggaccgccacaaccgtccccaccaggagatgggtcaactcaccatcgaggagaag
aaattccttctttcggtggagcggggtgatgttgccggcgtccgcaggatgctgctgcgg
tccagggagtccggatgtatgatgaacatcaactgcgtggacccactcggccgctccgct
ctactcatggccatcgataacgagaacctggagatggttgagctcctcattgagttcaag
gtggagactaaggatgctctcctccacgccatcagtgaggagtacgtggaggccgtggag
gtcctcctcgaccatgaggagacggtccacatccctggagaacctcacagctgggaggct
atcccgcccgagacggcgaccttcacgccggacatcacgccactcatcctcgccgcccac
agagacaattacgagataattaagatcctgctggaccggggggcgactctccccggtccg
catgacctaaggtgcggctgcgacgagtgcgtgacgtcccgcttggaggattctctacgt
cacagcaggagcaggataaatgcctacagagctctagcctccccatccctcatagcccta
tcctccaaggaccccatcctcacggccttcgaactctcctgggagctccgtcgactctcc
ttcatggaacacgagttccgcagcgagtaccaggaactacggaaacagtgccaggacttc
gctacggccttgctcgaccacactcgttcctcctacgagctggaggtcctcctcaaccac
gacccgacggggcctccgcacgaacacggggaacggatgcacctcaaccgcctcaagctg
gccatcaagctgaaacagaagaagttcgtggctcaccccaacgtgcaacagctgctggcc
tccatctggtacgaaggtttgcctgggttccgccgcaaaaacatggcgctgcaggcgcta
cagatcgtcaagatcggcatcctgttccccatcttctccgtcgtgtacatcctggcgccc
cacaccacgcccggccagaccatgcgcaagcccttcatcaagttcatctgccactcagct
tcctacctcaccttcctctgcttgctgatcctggcgtcgcagaggatagagactgtcatc
gtggactggttcggggcgacgcccactctcaagaagtgggtggccactgatgtcaccacc
cgccggggagccccgcccagtctggtggagtggctcatactggcgtgggtgtttggactg
atctggtcggagatcaagcagctgtgggacgtgggtctgagggagtatgtgggggacatg
tggaatgtcatcgacttcataaccaacgcgctctatgtggccaccatcgctctccgcatc
gtggcttattaccaggtgcagagggagatcagagagaacctgagcactgagaacctcccc
agacaggagtgggacacgtgggaccccatgttgatagctgagggcctcttcgctgctgct
aacatcttcagctctctgaagctggtgtacatcttcagcgtgaacccttacctggggccc
ctgcaggtctcactctccaggatggtggtcgacattctcaagttcatcttcctctacctg
ctcaccctcttcgccttctcctgcggtatgaaccagttgctgtggttctacgctgatttg
gagaagcagacctgcgacgaactgggcctgaacccggagggagaagatgagacaggaccc
aaaatcgactcttgtattgtctggaggagattttcaaacctcttcgagacgacccaaacg
ctcttctgggcggcgttcggcttgattgacctgaccaactttgagctgacgggaatcaag
ccattcacccggttctggggcatgctgatgttcggcacgtactccgtcatcaatgtcatc
gttctccttaacctcttaattgctatgatgaatcactcttaccagctggtgtccgtaagt
tctgagcgggctgacaccgagtggaagttcgcgcggagtaagctgtggatcagcttcttc
gaggagggagggacgtgtccgccgcctttcaacatcatcccgacgcccaagagcctctat
tacctcttccattggttctacaagaagttctgcggtcagaccaaggccgcgaagaaggag
cacatgaggacgattaggaggaaggctagacaagcaagcgagagggagttaagatatcag
aacatcatgaggaacctggtgcgccggtacgtgacggtggaacagaggaaggctgagaac
caaggggtgacggaagacgacgtcaatgagatcaagcaagacatctcggccttccgctgt
gagctggtcgagatcctcaagaactcgggcatgaacacgtcgacggcgacctccactggt
caaggtattctgccccgcggtagtactggcggcaagaagaaccgtcaaaaggagagaaga
ctcatgaaaggattcaacctgggcgtgaactcaataagttctaacctcagtttaggaacg
tcgacggtcctgcccccaacggtggaggtggcggaggtcgccgtcaagcgctccccgcaa
aacaagctagcgcggctggccaggctggcggaggcgagactcggccgcccgaccaacaag
aagcgttggggcacgctcgtcgaggccgctaagaatgccaaagtaaaaaagttattatcc
aggtcccgctccgacgagtcgctctcctccgatcctggcaacgagatgaacggggattca
gaggatgctcggggcgggaccgataccccgacgcccctgcagagcctgcccccggggata
ttaaggggcggggacggctcctcggagggcacacgacgggagcggagtgggtcgcggggg
agcggcacgatgcatctggatgcggcggcgctggtgagccaacacgagaccaccaagagg
ccgcccaagaactctgtgagctttgatcagtcggcgctcgcgggcgccagcagcagcagt
ccttcccactcatccaccgagacggagcctccgccaccctacccacagtggcctcgccca
gtacccaccgcctccaatctgacggaaacaaaccccaccgccacgtcgccctcgtcaggt
ggtagtgggtctctgccgccacttgcagtgagcgagtcctcggagcctctggtgagcggc
ggtccgccagccaacgggtcggtccagccgccccgtctgcctggtatccagccagtcaac
cgccacatggccgccgggtggctctga
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