Procambarus clarkii (red swamp crayfish): 123774730
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Entry
123774730 CDS
T07930
Symbol
swm
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcla01009
]
123774730 (swm)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123774730 (swm)
03041 Spliceosome [BR:
pcla03041
]
123774730 (swm)
Protein phosphatases and associated proteins [BR:
pcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123774730 (swm)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123774730 (swm)
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123774730 (swm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
RRM_Nup35
PWI
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
123774730
NCBI-ProteinID:
XP_045625215
LinkDB
All DBs
Position
68:13878994..13987951
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AA seq
1119 aa
AA seq
DB search
MIIESPDLLKQWLTSYLAPLCDADPEALAKYCLALVRKDRPVSELKASMIEQLDVFLQAN
TKSFVDKFLQVTTARSYLPKRSAPSSSSASSFNLDASSTNFTSNTDGGPPPLPPTPTPKQ
SSGHSPDSTTPPNAVPPPPPASSSTSVQPAPPLPPPSSAIVAPPPPPPESAPPPPPASVI
TRKEEVSSSQRSRKSDSERDRDDRRGRRRSPSRGRSRTRSRSGSRSRDRSRRSRSRGRSG
RSKYDDRRRRSPISKRYRRSRTRSRSRSPRRSRSPRRSRSRERKSRSRNRSRSITPRNNR
SSARGRSPPPIPRSPSPSRKSKSIPRADEKRESPHGASPVSETKLEPRSDPSSIMQSVVA
VKHPEFTLPPAGKKQRCRDYDEKGYCMRGDMCSFDHGSDPVVLEGISAVLDFPPPPVPGA
APSAPGYTPAPAPPQGVPTPRHPPPRHPQFVSTGEYTPRDPSLWVGQTNTNTGPYYGGNG
GPGRGASVGPRFSAPPPLLPNSTSRELINVPVNNGGHMGQCGGGGVRPSLAKRLGPAVPL
PHNLSVIQKPGRPDLDSCTLELRKIPPGLNTIAHLNDHFAKFGTVVNIQVHHEGNPENAL
VTFNSHSEANAAYRSTEAVLNNRFIKLFWHNPQIKTDRGGTYASHTVRPVHDRLGVRHPN
KTLNKTIVEPVSEDKNEKVMMSRGSLVKTVYNTHALHSAAAAASAVNVSTYTPTSPGSVT
PTSPVSGSHSLPTATGAVTPTSPLAGPPSLSTIVPDSTHAAAVDTKRQEIESILKQRELL
AAEVAAKHKVEKQKADAMKLRSEVEQRKRQLLDKQMQQLKVLVNKLETNKANMKSEEKKV
LLDTIKSLQAAIEATRSQVVGGDVPKSKVQVDREILDTELELYSVQAEGGDITKLRVQLN
QLRTQQQAAGYLPSRSLRHGPYGAARGGHYIRGRGVGSLGRGVPRGRGRGARGYGHSFAS
VDRRTTKLNASGFEREDKEEVLAHFSTLGKITNYIWDGQTPAVTIQYASRREAEKAMSEG
RTLGDRLLTLTWVFDTALPISTQSTATSMAGPHHVSSHTYTSVAPHTTTPLLSSDDTLEE
ITEEIVEEVETEEGEQPVLFEEEEEEVEEDEEEVRSWRR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgagagcccagacctgctgaagcagtggctgacaagctatctggcgccactg
tgtgatgctgaccccgaggcattagctaaatattgtcttgctctggtccgcaaagaccgt
cctgtatctgaactgaaggctagtatgattgagcaacttgacgttttccttcaagcaaac
acaaaatcatttgttgacaagtttcttcaggtaacaacagcaagatcgtacttgcccaaa
cggtctgctccatcgtcgtcgtcagccagctcttttaaccttgacgcatcgtctactaat
tttaccagcaatactgatggtggacctccaccattacccccaacacctacccctaaacaa
tcttctggtcactcccctgattctactactccgcccaatgctgtaccgccaccaccacct
gcttcatcgtctaccagtgtacagcctgccccaccactaccgccaccaagttctgcaatt
gttgctcctcctccgccaccccctgagtctgctcccccacctcctccagcctctgttatc
actcgtaaagaagaagtatcgtcatcgcaacgatctagaaaatctgattctgagagagat
agagatgatagaagaggcagacgcagatcaccatctcgaggaaggtcgcgtactagatca
agatctggttcccgaagtagagacagatctcgaaggtcacgttctaggggcagaagtggc
cgtagcaaatatgacgatagaagaagaagatcacctataagcaaacgatatcgacgctct
cgtacgagatcacgtagccgtagtccgaggcgatctcgaagtcctcgtcgatccaggtca
cgcgagagaaaatctagatcaagaaacagatcccgttccataaccccaagaaacaacaga
tcctctgcccgcggaaggtcgcctccccctattcctagatcacccagtccatcgagaaag
tcaaagtctattccaagggcagatgaaaagcgagagtccccccatggagcttcaccggtg
tccgagacaaagctggagccaaggagtgaccctagttccataatgcaaagtgtggttgca
gtcaaacatccagagtttacattaccaccagctgggaagaagcagaggtgtcgtgactat
gacgaaaagggctactgtatgcgtggggacatgtgctcctttgaccatggctctgaccca
gtagtgcttgaagggatcagtgctgtgctggactttccccctccccctgtgcctggagct
gcgcctagtgcccctggctacaccccggccccagcaccccctcagggggtgcccacaccc
cgccacccacctccaagacatccacagtttgtatctacaggtgaatacactccccgtgat
ccaagtctttgggttggtcaaaccaacactaacacagggccctattatggtggtaatggt
gggccaggcagaggagctagtgtgggtccaagattttcagctccacctccacttctgccc
aatagcacgtcacgggaactaataaatgttcccgtaaataatggaggtcacatggggcag
tgtggtggtggtggtgttcgtccatccttagcaaagcgactgggtccagctgttcccctt
cctcataatttatctgtgattcaaaaacctggacgtcctgaccttgatagctgcacgttg
gagctcaggaagattcctccaggtctcaacactatagctcaccttaatgatcattttgca
aagtttgggacagtagttaatatacaggttcatcatgaaggaaacccagaaaatgcctta
gtcaccttcaatagccactcggaggccaatgctgcttatcgtagtactgaggcagttctc
aacaacagatttatcaaactattttggcataatccacagatcaaaactgatcggggaggt
acttatgcatctcacacagttaggccggtacatgatagattaggtgtacgtcaccctaac
aaaacccttaacaagacaattgttgaacctgtcagtgaggataaaaatgagaaggtgatg
atgtcacgtggcagcctagtcaaaactgtttataatacccacgcccttcattctgctgct
gctgctgcaagtgctgtcaatgtatctacttacactcctacatcaccgggaagtgtcacc
cctacttctcctgtctctggatcccattccttaccgacagcaactggtgctgtcacaccc
acctcgcctctagcaggtcctccttcattgtcaacaattgtccccgattctacacacgct
gctgctgttgacacgaagagacaagagattgagtcgattctaaaacagcgagaactcttg
gctgctgaggttgcagccaagcacaaagtagaaaaacagaaagctgatgcaatgaaactg
agatctgaggttgagcagcggaagaggcagttgttggataagcagatgcagcagctcaag
gtactagtaaataaattggaaacaaacaaagctaacatgaaatcagaagaaaagaaagtt
cttttggatactataaagtctcttcaagcagcaattgaagccacaaggtcacaggtagtt
ggaggagatgtaccaaaaagtaaagtccaagtagacagggaaatccttgacacagaatta
gagttgtattctgttcaagcagaaggtggagacattaccaagttgcgtgtgcagcttaat
cagctgcgaacacagcagcaagcagcaggatacctgccttctcgctctcttagacatggg
ccatatggggctgcaaggggtggtcactatattcgtggacgtggagttggtagcctggga
cgtggtgttccccgaggtcgcggaagaggtgcacggggatatggtcattcttttgcatca
gtggacaggcgaactacgaagttaaatgcctcgggatttgagagagaagacaaagaagaa
gtcttagctcattttagtactttaggcaagataaccaattatatatgggatggacaaact
cctgctgtgactattcagtatgcttcacggcgtgaggcagagaaggccatgagcgagggt
cggactcttggagaccgtcttctcacccttacgtgggtctttgatactgctctcccaatc
tccacacagtccacagcaacgagtatggcaggacctcatcacgtatcgtcacatacatac
accagtgttgctccacacaccactacgccattgctctcttcagatgacactctggaggag
attacagaagaaattgtagaagaagtcgagacagaagaaggtgagcaaccagttctgttt
gaagaggaagaggaagaagtagaagaagatgaggaagaagtaagatcctggaggaggtag
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