Procambarus clarkii (red swamp crayfish): 123775072
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Entry
123775072 CDS
T07930
Name
(RefSeq) uncharacterized protein LOC123775072
KO
K05194
glycine receptor alpha-2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123775072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcla04040
]
123775072
Ion channels [BR:
pcla04040
]
Ligand-gated channels
Glycine
123775072
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Pentaxin
Neur_chan_memb
Laminin_G_3
Ldl_recept_a
Lectin_C
MELT
Crisp
Motif
Other DBs
NCBI-GeneID:
123775072
NCBI-ProteinID:
XP_045625856
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All DBs
Position
LG81:complement(6087177..6106903)
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AA seq
821 aa
AA seq
DB search
MTSYMVAVHSQWAETNLSTPFRHWSHFCFTYLLQTAEWHIYMNGQLEGQGHLPIASGPLL
GGGVYVLGQEQDKLGGGFDRDQTFSGEITALNVWFTVLNASTIRKLAGCESEEEGDALGW
SRTVWNISGEAQWQVKEMHQVCHQTTGRINFFADRFTLDDSKHFCKVVGGRVAVPVSEDE
NSWLYRTSQDDGNYCSSGLGSSYLWMGASDQVIEGTWQYLGTNLSVPWQGPWRGGKPNGG
LVENCLVMLAAPFAGQWSDIACVDSYQFCVACEFTHPSMLYLKGPALCTASPFNQEYVIG
SRQGSRTSLEGYFDSDIFWDLENSTWIIKSLKIPGAVARWKPEGKDLYPLGTKTWVMGGK
VCDLQVGEEVNLTLSVCGGGEFTCSDGTCINLTQRCDLRINCPDQSDEASCSAVSLPDTY
RNTIPPPPTKEGQPLDIYFFIDIISFLSIATEDLTFTTTMSLHLRWQDVRLTYHNLHDEH
TLNLLSKDAVEKIWTPTVSFSNAHGNVFTNLERGSRVECVRQKPSRPSPPQYTHETNIFS
GLENSMEMSQSYTAQYSCDFDLIMFPFDAQVCSLQFTLVSAASSYMVLKPSSANYSGPKN
LIEYTIGRVTIQRTQEVQFSSVKVEVRFFRRYNFYLLTLYIPTALLIVIAYASFFFNPDD
FNSRITVALTALLVLASLFTQMSNSLPKTSYFKLVDVWLFFAIVIIFVVVILQTLIDFFA
DKDIFSCFSPKSSTLIQVLEKKPKRNQNDERKSRDLSMGSSFPKVSGGGFPQVPGGGFPR
VPGLANLAMLKFSRILIPIVFVLFNIIYWASAFNYVMNLNM
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtacatggtagcggttcacagccagtgggcggagaccaacctgtcgacgccc
ttccgtcactggagccacttctgcttcacgtacctccttcagacagcagagtggcacatc
tacatgaacggtcagctggagggccagggccacctgcccatcgcgtctggacccctacta
ggcggcggggtttatgttctaggtcaggagcaggacaaattgggtggtggattcgaccgt
gaccagaccttcagcggggaaatcacagcactcaacgtgtggttcacagtacttaacgca
tccaccatcaggaagctggcagggtgtgagagcgaggaggagggcgacgccctgggctgg
tcgaggacggtgtggaacatctctggggaggcgcagtggcaggtgaaggagatgcaccag
gtgtgtcaccagaccactggacgcatcaacttcttcgctgacaggttcaccctcgacgac
tccaagcacttctgtaaggtggtgggcgggagagtagcggtgcctgtgtcggaggatgag
aactcctggctctatcgcacgtcccaggacgacggcaattattgctccagtggcttaggc
tcctcctacctgtggatgggtgcctccgaccaagtgattgagggcacatggcagtacttg
ggcacaaacctgtccgtgccctggcaagggccctggaggggaggaaagcccaacggtgga
ctcgtggagaactgtcttgttatgctggcggcacctttcgctggtcagtggtccgacata
gcctgtgttgactcctaccagttctgtgtggcctgtgagttcacacacccgtccatgctc
tacctgaagggccccgccctgtgcaccgcttcgccttttaaccaggagtacgtcataggc
agcagacaaggaagtcgtacctccctggaaggatatttcgactctgacatcttctgggac
cttgaaaactcgacctggattatcaagtctctcaagattcctggggcggtggcgcgctgg
aagccggaggggaaagacttgtacccgttggggaccaagacgtgggtgatgggaggcaag
gtgtgcgacctgcaggtgggtgaagaagtaaacctcaccctctcggtgtgtggtggggga
gagtttacctgttctgacggcacctgcatcaatctcactcaacgctgcgacctgcgcatc
aactgccctgaccagagtgatgaggcttcgtgctcggccgtatctcttcccgatacatac
cgcaacactattccaccacctcccacaaaagaaggtcagcccctagacatatacttcttc
atcgacataatttccttcctctcaattgccacggaagatcttaccttcacaacgaccatg
tctctgcacctgcgatggcaggacgtgcgcctcacctaccacaacctgcacgacgagcac
accctcaacttgctctccaaggacgccgtggagaagatctggactccgacagtatccttc
agcaacgcccacggcaacgtcttcaccaacctggagcggggatcccgtgttgagtgtgtc
cgccagaagccatccaggccttccccgcctcagtacacacacgagaccaacatcttctct
ggcctggagaacagcatggagatgagtcagtcctacaccgctcagtacagctgtgacttc
gacctcatcatgttccccttcgacgctcaggtgtgctcgctacagttcactctggtgtca
gcagcctcctcctacatggtcctcaagccctcctctgccaactactctggcccaaagaac
cttattgagtacacaataggtcgagtaacgatacagaggacgcaggaggtccagttctcg
agtgtgaaggttgaggtgaggttcttcaggcgctataacttctacctgctgaccctctac
atccccacagccctcctcatcgtcatcgcctacgcctccttcttcttcaatccggacgac
ttcaactctcgcatcactgtggctcttacagctctgctcgtcctggcttccttgttcaca
cagatgtccaactccctgcccaagacgtcttacttcaagttggtggacgtgtggctcttc
ttcgccatcgtcatcatcttcgtggtggtgatcctccagacgctcatagatttcttcgct
gacaaggacatcttctcctgtttctcacctaagagctcgaccttgattcaggtgctggag
aagaaaccaaaacgaaaccaaaatgatgaacggaaatcaagagatctgtctatgggatcc
agcttcccaaaggtgtctggaggcggcttcccacaggtgcctggaggtggcttcccaagg
gtgccaggactagcaaatttggccatgctcaagtttagccggattcttatacccatcgtc
tttgtcctcttcaatattatctactgggcctctgccttcaactacgtcatgaatttgaac
atgtag
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