Pedobacter cryoconitis: AY601_3026
Help
Entry
AY601_3026 CDS
T04341
Name
(GenBank) Molecular chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcm03110
]
AY601_3026
Chaperones and folding catalysts [BR:
pcm03110
]
Heat shock proteins
HSP100
AY601_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
IstB_IS21
Mg_chelatase
AAA_18
AAA_14
RuvB_N
NACHT
TniB
ATPase_2
AAA_7
AAA_24
Zeta_toxin
ResIII
Torsin
AAA_3
AAA_25
T2SSE
NBD_SMAX1
AAA_28
DNA_pol3_delta2
DUF99
Motif
Other DBs
NCBI-ProteinID:
AMP99899
UniProt:
A0A127VF28
LinkDB
All DBs
Position
3637523..3640135
Genome browser
AA seq
870 aa
AA seq
DB search
MNFNNFTIKAQEAVQQASEIAQGNQQQAIETAHLLKGLLTVDENVVSYVLKKLNVNLNTL
NINLDEQIAKFPKVSGSNGYLSSGANSALQKAQTYLKEFKDEFVSVEHLLLGILSVNDNT
SKLLKDQGVTEKDLKKAIAALRGDNRVTDQNAEASYNALNKYARNLNEYAESGKLDPVIG
RDEEIRRVIQILSRRTKNNPILIGEPGVGKTAIAEGIAFRIIKGDVPENLKTKTVYSLDM
GSLIAGAKYKGEFEERLKAVVKEVTQSEGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLNEYQKYLEKDKALERRFQKVVVDEPDTQDAISILRGLKERYETHHK
VRIRDEAIIAAVELSQRYISDRFLPDKAIDLMDEAASKLRLEMDSVPENVDELDRKIMQL
EIEREAIRRENDDKKVKSLGEEIANLSAERDELKAKWQGEKDVVDGINTELEQIENYKLE
ADQAERAGDYGKVAEIRYGKIKEAQDKVEKLKVVLESQQGEGRMLKEEVTADDIAGVVAR
WTGIPVTKLVSSEREKLLNLEDELHKRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFI
FLGTTGVGKTELAKALAEFLFNDDNALTRIDMSEYQERHSVSRLIGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRLVNFKNTIIIMTSNIGS
HLIQENFKNLDDANRDEVIAKTKNELFELLKQTIRPEFLNRIDELIMFTPLNRTEVRNIA
ELQFRHVQDTLAEMGVEIEATPEALDWLAELGYDPQFGARPLKRVIQKRVLNELSKEILA
GKIDKDSKIKLDMFDNKFVFLNNKKETPAS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacaactttactataaaagcccaggaagcagttcaacaggcttccgaaata
gcccagggcaatcagcaacaggctattgaaacggcccatttgctaaaagggttgcttact
gttgatgaaaatgtagtttcttatgttttaaagaagctaaatgttaatttaaacacgctc
aacataaatctggatgagcagattgcaaaattccctaaggtaagtggcagcaatggatat
ttatcttctggtgcaaactctgccttgcaaaaagcgcagacttatttgaaagaatttaag
gatgaatttgtttctgtagagcatcttttactgggtatattatccgttaacgacaatacc
tctaaacttttaaaggatcagggcgtaactgaaaaagatcttaaaaaagctattgctgct
ttacgtggtgataacagagtaactgaccagaatgctgaagcaagttataatgctttaaat
aaatacgcaaggaatttaaatgaatatgcagaatctggaaaactggatcctgtgataggc
cgcgacgaagaaattcgccgcgtaattcaaatactttccagaagaaccaaaaacaaccca
attttaatcggagaacctggtgtaggtaaaactgccattgcagaaggtatcgctttcagg
attattaaaggtgacgtacctgaaaacctgaaaacaaaaacagtgtattcattggatatg
ggttctctgattgccggtgcaaaatataaaggagaatttgaagaacgtctgaaagctgtt
gtgaaagaagtaacacagagtgaaggggatatcattttatttattgatgagatacataca
ttggtgggagctggtggcggtgagggagctatggatgctgcaaacatcctgaaacctgct
ttagcccgtggtgaattacgtgcaattggcgcaacaaccttaaacgagtatcagaaatat
ctcgaaaaagataaagcactggaacgtcgttttcaaaaagtagtagtagatgaacctgat
acgcaggatgcgatctctattttaaggggattgaaagaaagatatgaaacgcatcataag
gtcagaatccgcgatgaggcaattattgctgctgtagaattatctcagcgctatatcagc
gaccgttttcttccagataaagcgattgacttaatggatgaagctgcttctaaattacgt
ttagaaatggatagtgttccagaaaatgttgatgagctggaccgtaagattatgcagctt
gaaattgaaagagaagcgatcagaagagaaaatgatgataaaaaagtaaaatctcttgga
gaggaaatcgctaacctttctgcggaacgcgatgagctgaaagcaaaatggcagggagag
aaagatgtcgttgacggcattaataccgaattggagcagatagaaaactataaactggaa
gctgatcaggcagaacgtgcaggagattatggaaaggtagcagagatccgttatggtaag
attaaagaagcccaggataaagtagagaaattaaaagtagtactggaaagtcagcagggc
gaaggccgtatgctgaaagaagaagtgactgcagatgatattgcgggtgttgtagcacgc
tggacaggcattccggtaacgaaattagtatccagtgaacgtgaaaaattgttaaacctg
gaagatgagctgcataagcgcgtagctggacaggatgaagctattgaagcgatatccgat
gcaatacggcgttcgcgtgctggtttgcaggataaacgtaaaccgattggctcattcatc
tttttaggtacaacaggtgtcggtaaaacagagctggctaaggcattggcagaattcctt
tttaacgatgataacgcgttgacaagaattgatatgagtgaatatcaggaaagacattct
gtttccagattaattggggcgcctccgggatatgtaggttatgatgaaggtggtcagctt
acggaagccgttcgccgcaaaccttactcggtagtactgctggatgaaattgaaaaagcg
catcctgatgtatttaacattttactgcaagtactcgatgatggccgtttaactgataat
aaaggaagactggttaattttaagaatactattattatcatgacttccaatattggttct
catttaatacaagagaactttaagaacctggatgatgcgaacagagatgaggtaattgcg
aaaaccaagaatgagctgtttgaattattgaaacagacgatcagaccggagtttttaaac
agaattgatgaactgatcatgttcacgccattgaaccgtactgaagtgagaaatattgca
gaattacaattcagacatgttcaggatacacttgctgaaatgggtgttgaaattgaagcc
actccagaagccctggattggctggcagaactgggttatgatccgcagtttggagcacgt
cctttaaaaagagtgatccagaaacgtgtattaaatgaactatctaaagaaatactagct
ggaaagattgataaggatagtaaaattaaactagatatgtttgataacaagttcgtattt
ctgaacaataaaaaggaaacacccgcttcataa
DBGET
integrated database retrieval system