Phanerochaete carnosa: PHACADRAFT_120096
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Entry
PHACADRAFT_120096 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHACADRAFT_120096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_120096
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PHACADRAFT_120096
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PHACADRAFT_120096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
nSTAND3
SRPRB
Motif
Other DBs
NCBI-GeneID:
18907874
NCBI-ProteinID:
XP_007395448
JGI:
Phaca1_120096
UniProt:
K5W800
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MTEAPAANTREWVLNPESEYRFELEQRTSLAIKLIQGHAEIFGAELVDGKTYIFYGECKA
AVFTWQGCTIQICQPSTDYISEETPMAAYANLHIAFEQMRIRSLVQIKNYDNGRITPPQQ
GESTEPPRVLILGPENSGKTSIAKILVNYAARAGQEWTPMLINVSPSEGGCMLPGTISAT
PIPAPIQTSTPAHTLGNSATTAPAHMASNSLLPLAYWYGHTETKRNPLLLERLIRNLGEN
VWDRVADDPQARASGTVVDTPSSFAAGSGSGAEHHRQSLIKACVDAFRINVILVVGHEKL
HVEMQRTYGARGLTIVKIPKSGGVVELDALFRARVLRAQLHAYFYGERVEPPRGLPAPLA
TAPPAAGYLVAGEQPTDFTLAPASQVVAFGDLQIWRIGEETMAPQSALPIGATRVVSEMQ
PLPVDPAQAGSGLYNAVLALLAPPNPDESERYDEEILDLHVVGFVVITSIDLPNKKMTVL
APTQGSLVGRTAIVGALEWQE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagcacctgcggccaacacccgagagtgggtgctcaatccagagagtgaatac
agattcgagcttgagcagaggacctccctcgcgatcaagcttatacaaggtcatgctgag
atctttggtgccgagctcgtggacgggaagacgtatatattctatggagaatgcaaagca
gccgtcttcacctggcaaggatgtacaatacagatatgccagccttcaacggattacatc
tcagaggaaacacccatggccgcttacgccaatctgcatatagcctttgagcagatgcgg
attcgatctttggttcagataaaaaattatgacaatggaagaatcacgcctcctcaacaa
ggagagagcacggagccgccgcgagtgctgatcctgggccccgaaaactcagggaagacg
agcatcgcaaagattctagttaattatgccgcacgtgctggacaagaatggactccgatg
ttgataaatgtgagccccagtgaaggcggatgcatgctaccgggcacaatctcggctact
ccgatacccgccccaatccaaacttcgacaccggcacatactcttggcaattcagccacg
accgcacctgcgcacatggcgtcgaactccttgttgcctctcgcgtattggtacggtcat
acggagacgaagcggaacccactcttgctcgagcgcctcatccgtaacttgggcgagaac
gtctgggacagagtcgcagacgaccctcaagcccgagcgtccggcaccgtcgtcgacaca
ccttcttcgttcgccgccggcagcggcagcggcgcggagcaccacagacaatcactcatc
aaagcctgcgtagacgccttccgaataaacgtgatcctcgtcgtcggccacgagaagctg
cacgtcgagatgcagcgcacgtacggcgcgcgcggactcacgatcgtcaagatccccaag
tcgggcggcgtcgtcgagctcgacgcgctcttccgcgcgcgcgtgctgcgcgcccagctg
cacgcctacttctacggcgagcgcgtcgagccgccgcgcggcctgcctgcgccgctcgcg
acagcgccgcccgccgcgggctacctcgtcgcgggcgagcagccgacggactttacgctc
gcgcctgcgagccaggtcgtcgcgttcggggacctccagatctggcggattggcgaggaa
acgatggcgccccagtcggcactgcccattggcgcaacgcgcgtcgtgtcggagatgcag
ccactgcccgtggaccccgcgcaggcgggctcgggcctctacaacgccgtgctcgcgctg
ctggcccctccgaacccggacgagtccgaacggtacgacgaggagatcctcgacctccac
gtcgtcgggttcgtcgtcatcacatcgatcgatctaccgaacaagaagatgacggtgctc
gcgcctactcagggctcgcttgtgggacggactgcgatcgtgggggctctggagtggcag
gaatga
DBGET
integrated database retrieval system
