Phanerochaete carnosa: PHACADRAFT_144527
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Entry
PHACADRAFT_144527 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_144527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_144527
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHACADRAFT_144527
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PHACADRAFT_144527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
DUF167
Motif
Other DBs
NCBI-GeneID:
18908627
NCBI-ProteinID:
XP_007396074
JGI:
Phaca1_144527
UniProt:
K5UZY2
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MDNPANPNIHTIVKAQIVFLLSTLTEDNFERNQVEIRSLSEQHGLETYLHFIRRLIVHSS
SRISASSSPASLDPSSALTFRLLMEEVQRLARDPFLADRFRDGVDKGEGEAFRNFDLLRF
MDRVGLRPLERLVLASSIAAAPTRRELSGMSVNIIRMEFENAVLSLCQHPSFDQADLSPN
QVAKLMSNLLSEAPTDGPILDATQRQALIMAAQTKYGPEIIMPILQRILPTIHLQQNTTL
VQLMIQLGPEMTCDPDIALAVLARFGMTENSPPQDEQVVEIISQLARLAAEGPISVDVGA
LVHVLARLNQNLNWANAIHAFDRPDRHGVETSTLKLLIAILLSCPLESEHHAVSGFWQIW
NNSLYQLRLLDALLSLPSDTFNFVTLPGRRIVSTDDIPATSPSIKALAANVQVHTWNSLD
LFEVLVGLADSESLEVRNFVREMLDKAVKISAEIVQMGLLQVAGLPWGEIRLEYSQRLLT
MFLAGHPNHQLVFMRIWQIEPKYLLNSLREFYEENPLNITRILDVAQDLKILDHLLDCKP
FAFALDVAALASRREYLNLDKWLADNVTAHGADFLHGVIGFLDSKMESEKSTRVSDPAVE
SRTMPLSPQTITIFLRVLRANSNLMHESDVDYCLEVRNACLQIHPRLMNLMPGTDVEPGF
TVVTYSQEVEAEVDSIYKQMYDEHNTIDEVIALLQRNKNSNNPRDHEIFSCMLHFLFDEY
KFFQSYYPPRELAMTGYLFGSLIQYQLVDYIPLGVAIRYVLDALNCPPETNLFKFGLQAL
VRFESRLPEWQPLCQALLKIPHLLDARPELVNILGRAIAMGGEGQNNTADLRTLPGGTIP
EAPSAFTAVRLDLTDGSPESPAEEVSDKILFIVNNLAPSNFDAKLTEMKEQFQEQHSRWF
ANYLVDQRVSTEPNNHQLYLRFLDALNIKALFNFVLHETFVKSAQLLNSEKTLQVASERT
VLKNVGAWLGSITLARDRPIKHKNLSFKDLLIEGFDNGRLIVAIPFVCKTLEPCARSKVF
GPPNPWLMAVISLLAELYHYAELKLNLKFEIEVLCKSLDIDLEAVQATTILRNRPLSDSG
PQLPEYPSNIDSLPMGGYDPARMQSDGQVIALSGARASDQRALDAHIENILASVLPMVVI
NPALAPLNTNQSFKRAIQVAVERSIREIIMPVVERSVTIAGISTRELVLKDYVTEQSEEK
LRHAGRLMSQKLAGSLAQVTCKEPLRGNLASHLRVVLTEFGFAEIVSEEIITLVVNDNVD
IACQAIEKAAMDRAALEVDEAFASHFEARRRHREQRPGQPFWDPAIPASSQFSAILPDPL
RIRPMGVQPIQAAVYEDFATDGKRRTGVISRPGSTVSYTHNDPLSSIYNPSPAPDAVQGR
TLLSHVDIMDRFTALIKDLESVLPQLPIQSLTALPPNHEIRQLLREILFLAASSADHQRT
PLLMSQKIVQLLYKSSMQLGREIYVALLDKLCHSFEEVAKEAINWLIYAEDERKFNVPAT
VTLLRSGLVNLGQEDQQLAKFLYTEPKPSLLNFAAGLIRECLSSDPPVASQAQFAYTLEI
LTQLAQQGKANDEVLRLLEDLRGVRRPSTTAPDAGIARQPSVKPENDSLREKLFIWFQQW
VHIYQRSPLPEKSFVPFISQLTKQGILKAEDVSSFFFRVCMESSVNSYVKCVNSGEFDFA
FIALDAFSRLIVYMIKYHGDASGVNNEQAKVHYLTKILSIVVLVLANMHEEQGLLFSQKP
FFRFFSSLLNDLHAIESNLSVVYFPLLLAVSDTFSSLQPTFFPGFAFSWTSLISHRLFMP
KLLLSENREGWSTFYRLLLALFKFLTPFLKASDLQPATRDLYRGSLRLLLVLLHDFPEFL
SEYYFTLCDIIPPHCIQLRNVILSAFPPTIILPDPHLRNVKFDSIPEMGPIPPVLSDFSS
VLKAGDLRTYLDQYLLNRGSPSFLPSLKDHLLLSEGSTDRYNLSLMNALVMYIGVSSVAQ
AKARSGSSLFVASDPGVVALQYLATNLDVEGQHHLLSAMVLHLRYPNAHTHWFSSLMLHL
FYELKDDKFREIMTKVLLERFLVHRPHPWGALVTFIELLRNSKYDFWNHDFIRIAPEVTL
LLETVARSIFQS
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atggataaccccgctaacccgaacatacataccatcgtcaaagctcaaatcgtcttcctc
ttgtcgaccttaacggaggacaacttcgagcggaaccaagtcgaaatcagatccctctct
gaacaacatggccttgaaacctacctgcacttcatccgacgtctgatcgttcactcttcc
tcccgaatatccgcctcctcttcccccgcgtcgttggacccctcttccgccctcaccttt
cgcctgctaatggaagaagtgcaacgtctggcacgcgacccttttctcgcagaccgcttc
agagatggtgtcgataaaggcgagggggaggcattccgcaacttcgacctgttgcgtttt
atggacagagtgggtttacggccgctcgagcgactcgttctggcatcttccatcgcagcc
gctcctacgcgacgagagttgtccgggatgtcggtcaatatcattcgcatggagttcgag
aacgccgtcctctcgttgtgccagcacccatccttcgaccaagcggacttgtccccaaac
caggtcgcgaagctgatgtccaatctcctcagcgaggctccaaccgacggccccatcctc
gacgcgacccagcgacaagcgctcataatggcggctcagacgaagtatggcccggagatc
atcatgcctatcctgcagcgcatattgcccaccatccatcttcaacagaacacgaccttg
gtgcaactgatgattcagcttggaccggaaatgacctgcgatcctgatatcgcgttagcg
gtgttggctcgctttggaatgactgagaacagtccgccgcaggacgagcaggtggtggaa
attatttctcagttggcgcgcttggctgcagaggggcctatctcggtcgacgtgggcgcg
ctagtgcatgtcttggctcgtttaaaccagaacttaaactgggcgaacgcgatccatgca
ttcgaccgaccagatcgtcatggcgtggagacgtcgaccctgaagctactcattgccatt
ctccttagctgtcctcttgagtcagaacatcacgcagtttcaggtttctggcagatttgg
aacaattcgctttaccagctgcgcctcctagatgctctcctctctctgcctagcgacact
ttcaacttcgtgaccttgcctggtcgacgtatcgtctccaccgatgacatccccgcgact
agtccgagcatcaaggcgttggctgcaaacgtgcaggtgcacacttggaattcgctggat
ctattcgaggttcttgttggtttagcggactccgagtccttggaagtccgcaacttcgtc
cgggaaatgctagacaaggcagtcaagattagcgcagagattgttcaaatgggtctcttg
caggtggcaggtttgccctggggggagatccgacttgagtactcccagcgactgctcacg
atgttcttggcagggcatcctaaccatcagctggtgttcatgaggatctggcagattgag
ccgaaatatctcctaaactcgttgcgagagttctacgaggagaaccccctgaacatcact
cgcatcctagatgtggcgcaggatttgaagattttggatcatctcctcgattgcaagccg
tttgcgtttgctttggatgttgctgcgctcgcgtctcgccgcgaatacttgaatctcgac
aaatggcttgcggacaacgtgaccgctcatggtgctgacttccttcatggcgtcatcggc
ttcctcgactcgaaaatggaaagcgagaagtcaactcgagtttccgaccctgctgtggaa
tctcgcacgatgccgctcagcccccagactataacaatcttcctccgcgtcctccgcgct
aattccaatctcatgcacgagagcgacgtcgactattgtctcgaagtccgtaatgcctgt
cttcagattcacccacgcctcatgaacctgatgcccggcacggacgtcgaacccggcttc
accgtcgtcacctactctcaggaggtcgaagcggaagtcgattcgatctacaagcagatg
tacgatgagcacaacacaattgacgaggttatcgccttgctgcaacgcaacaagaactcc
aataacccccgtgaccacgagatcttctcctgcatgctgcacttcctgttcgacgagtac
aagttcttccaatcgtactaccctcctcgcgagttggccatgacaggctatctgttcggg
tcgctcatccaataccaactggtagattacatccccttaggtgtagctatccgctacgtc
ttggatgccctgaactgcccgccagaaaccaacctcttcaaatttggtctgcaggctctc
gtcaggttcgagtctcgcctgcccgagtggcaacccctgtgccaggcgctcctcaagatc
ccgcatctcctagatgcgcgccccgagctcgtcaatattctcggacgggcgattgccatg
ggcggtgaaggccagaataataccgctgacttgcgcacgcttcctggtggcaccattcct
gaagcaccatcagctttcaccgccgttcgcctagacttaactgacggcagcccggagtcc
cctgctgaagaggtatccgacaagatactcttcattgttaacaaccttgccccttcgaac
ttcgacgccaagctgacggagatgaaggagcaatttcaagagcagcactctcggtggttc
gccaattaccttgtggaccaacgtgtcagtaccgagccgaacaaccaccaactgtacctt
cgcttcctcgacgctctcaatatcaaggcgctattcaacttcgtcctgcatgagactttc
gtgaagtccgctcaacttctcaactccgagaaaactcttcaggtggcttcagaaagaaca
gtcttgaaaaacgttggagcatggctcggtagcattaccttggcgcgcgatcgtcccatc
aagcacaagaatctatccttcaaagacctcttgattgaaggtttcgataacggacgcctc
atcgtagcgattccgtttgtctgcaaaactctcgagccatgcgctaggtctaaggttttc
gggccgccgaacccgtggttgatggcggtcatttcactcctcgcagagttataccactat
gctgaactcaagctcaacctcaaattcgagatcgaggtgctttgtaagagtctcgacatc
gacctcgaggcagtccaggcgacgactattcttcgtaaccgtccgctttccgattctgga
ccgcagctgcctgagtaccctagtaacattgattcgctgcccatgggagggtacgatccg
gcccgcatgcagtccgacggtcaggtcatcgctcttagcggcgcccgtgcctctgatcag
cgtgctctggatgcgcacatcgagaacatcttggcgagtgtgctacctatggtggtcatc
aatcccgctttggcgcctttgaacaccaaccaatctttcaagcgtgcgatccaggtggcc
gttgagcgttcgattcgcgagatcatcatgccggttgttgagcgttctgtcacgatcgcg
ggcatctctactcgtgaacttgtcctcaaggattatgtgactgaacagagcgaagaaaag
ctgcgtcacgctggccggctcatgagccagaagcttgcaggaagcttggcccaggtcacc
tgcaaggagcctttgaggggaaaccttgctagccatctccgcgtggttttgaccgaattc
ggcttcgctgagattgtctctgaggaaattatcaccctcgttgtcaacgacaacgtcgac
attgcatgccaggccatcgagaaagcagcaatggatagggccgccctcgaagttgatgag
gcattcgcctcgcacttcgaagccaggaggcggcaccgcgagcaacgccctggacagccg
ttttgggaccctgccatccctgcctcgtcgcagttttccgctatcttgcccgaccccctg
cgtatccggccaatgggcgtacagcccatccaggcggccgtttacgaggactttgccacg
gatgggaagcggcgcacaggcgtgatcagtcgccctggctccacagtgtcttacactcac
aacgaccctctctcgtccatctataacccttctcccgcgccagatgcggttcagggcagg
acgttactgtcacatgttgacatcatggataggttcactgcgctgattaaagaccttgag
agcgtccttcctcagcttccgattcagtcgttaactgctttgccacctaaccacgagatt
cgccagctccttcgcgaaatccttttcctggcagccagctcagcagatcaccaacgcacc
ccgctgttaatgtcgcagaagattgttcagcttctgtacaaaagcagcatgcagctcggg
cgcgagatttatgtcgctttactggacaagctgtgccactcgttcgaagaggtagcaaag
gaggccattaactggttgatatacgccgaggacgagcgcaagttcaatgtccctgccact
gtcaccctacttcgcagcggtctcgtcaatctcggccaagaggatcaacagctcgccaag
ttcctatacactgagcccaagccgtcgttgctcaattttgctgctggtctgattcgcgaa
tgcttgtcgagtgacccaccggtcgcttcgcaggctcagttcgcttacactttggagatc
ctgacacaactcgctcagcaaggaaaggctaatgacgaggtgttgagacttcttgaagac
ctgcgtggcgtgcgccgtccttccaccacggcacctgacgcaggaatcgcgcggcagccc
tcagtgaagcctgagaacgactcgctcagggaaaagctgtttatctggttccaacaatgg
gtccacatctaccagcgctccccgttacctgaaaaatctttcgtacctttcatcagccag
ctgacgaagcagggaatcctgaaggccgaggacgtctcttcgttcttcttccgagtctgc
atggagtcgagcgtcaacagctatgtgaaatgcgtcaattctggagagttcgacttcgcc
ttcatagctctcgatgctttctcgagactcatcgtgtacatgatcaagtatcacggtgat
gcttcgggcgtgaacaacgagcaggcaaaggtgcactacctcaccaagattttgtctatc
gtcgtcctggtgttggcgaacatgcacgaggagcagggactcttgttttcccagaagccc
ttcttccgcttcttctccagcctcttgaacgatcttcatgcgattgagagcaatctcagc
gtcgtatacttcccgctcctgctagccgtcagtgacactttcagctcgctccagcctacc
ttcttcccgggtttcgcattctcctggacgagcttgatttcgcaccggctgttcatgcca
aagttgctactatccgagaatcgcgagggttggtctaccttctacaggctgttgcttgcg
ctgttcaagttcttgactcccttcctgaaggcttccgacctgcagcctgccactcgggac
ctctaccgtggttctcttcgacttctacttgtcctgctacacgacttccccgaattcctc
agcgagtattacttcacgctttgtgacataatccctccccactgcatacaactgcgcaac
gtcattctcagcgcgttcccacctacaatcatcttacccgaccctcacctccgtaacgtt
aagttcgattccatcccggagatgggcccgataccccctgtgttgtcagacttctcctcg
gtcctcaaggccggagacctccgcacctatctggaccagtatctattgaaccgtggttcc
ccgtccttcctgccctcgctcaaggaccaccttcttctctccgaaggttcgaccgacaga
tacaacctttcgctcatgaacgctctcgtcatgtacatcggtgtatcctccgttgctcag
gcgaaggccaggagcggcagctcgctcttcgtagctagtgacccaggtgtagtcgcactg
cagtaccttgctaccaaccttgacgtcgaaggtcaacatcaccttttgagcgccatggta
ctgcacttgcgctaccccaatgcgcacacgcattggttcagctcgctcatgctgcacctc
ttctacgagctcaaggacgataagttcagggagatcatgacgaaggttctcctcgagcgc
ttcctcgtccaccgccctcacccttggggagcattggtcacgttcatcgagctactcagg
aactcaaagtacgacttctggaaccacgacttcattcgcattgcacctgaagtaacgctt
ttgctcgaaactgtcgcaaggtccattttccaatcctag
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integrated database retrieval system
