KEGG   Phanerochaete carnosa: PHACADRAFT_173680
Entry
PHACADRAFT_173680 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
pco  Phanerochaete carnosa
Pathway
pco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHACADRAFT_173680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pco03041]
    PHACADRAFT_173680
Enzymes [BR:pco01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     PHACADRAFT_173680
Spliceosome [BR:pco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PHACADRAFT_173680
 Complex C
   U5 SnRNP specific factors
    PHACADRAFT_173680
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA CMS1
Other DBs
NCBI-GeneID: 18909642
NCBI-ProteinID: XP_007395865
JGI: Phaca1_173680
UniProt: K5WYG0
LinkDB
Position
Unknown
AA seq 668 aa
MASSRSQPLSIETLLQKQKEEKESAAKPKFLTKEQRAKLALEKREQEIREQKEREERARQ
ERETLERGAEEHRQKQRERERAAPSTPLITDSAEYVPPMTDNDLSAIRSRYLGVDKKKRK
IRKMNDRKFVFDWDEQDDTFSAEAPAAVGSQRQGAQVMFGRGHIAGMDDGGTVVPGKKND
AEGPGTQLADALERRRAAKTGIDERHWSEKKLEEMRERDWRIFREDFSIASRGGQIPHPL
RSWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML
SFISKLPLFTDENRHLGPYSLILAPTRELAQQIESETKKFAGSLGFTCVSIVGGRAVEEQ
QFNLRAGAEIIIATPGRLKDVIERHVIVLSQCRYIVMDEADRMVNLGFEADLTFILDKLP
SDTMEGEDQGEQMDIDGETMIKKGRTRVTTLFSATMPPPVERLAKKYLKRPAIITIGEAG
RAVDTVEQRVEFVTGDEKKKQRMLEILNSGQYASPIIAFVNQKKTADMVAKDLQRAGWNA
ATLHSGKNQEQREAALQSLRTGEADILVATDLAGRGIDVTDVTLVINYQMSNTIEAYVHR
IGRTGRAGKQGTAITFLTNDDEEVMYDLRQEISKSPVSKVPPELAKHEAAQHKVSKEMKR
KRDAEDQG
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcgagttcaagatcacagcctctatccatagagacgctgttgcagaagcagaaagaa
gagaaagaatccgctgccaagcccaaattcctcacgaaggagcaacgagccaagcttgct
ctggagaagagggagcaggagattagagaacagaaggaaagagaggaacgagctaggcaa
gagcgcgagacgctagagagaggagcggaggagcatcgtcaaaagcagagggaacgtgag
cgtgctgcaccctcaacacctcttatcaccgactctgcggagtacgtcccgcccatgacc
gacaacgacctgtcggctatccgttcgcggtatcttggagtggataagaagaaacgtaag
atacgtaagatgaacgatcgcaagttcgtctttgattgggacgagcaagacgatacgttc
tctgcggaggcacctgctgcggtggggagtcaacgacagggtgcgcaggtcatgttcgga
cgtggccatatcgctggtatggacgatggaggcactgttgtgcccggcaagaagaatgat
gcggaaggccctggaacgcaactggcggatgcattggaacgtaggagagctgcgaagacc
ggtatcgacgagaggcactggtctgagaagaagctggaagagatgagggagcgtgactgg
cgcatcttccgagaagacttcagcatcgcttcccgaggtggtcaaatcccccatccatta
cgctcctggacagaatccgatattcctcagcttctattggatgtaatcgagcgcattggc
tataaggagccctcgcccattcaacgtcaagccatccccatcggtctacagaatcgggat
atcatcggtattgctgaaacaggttccggtaagactgctgctttcgtcattccgatgctc
tccttcatctccaagttgcccctgttcacggacgagaacagacatctcggtccctactct
ctcattctcgctcctactcgtgaactggctcagcagattgagtcggaaacaaagaagttc
gctggttcgcttggcttcacttgtgtgtctatcgttggtggtcgcgctgtcgaagagcaa
caatttaacctgcgagctggtgcagaaataatcatcgccactccaggtcgtttgaaggat
gttatcgagcgtcatgttattgtgctatcacaatgtcggtacattgtcatggacgaagcc
gatcggatggtcaacctcggtttcgaggccgacctgacgttcatcttggacaagctaccg
agtgatactatggagggagaggaccaaggcgagcagatggacatcgacggcgaaacgatg
atcaagaagggtcgaacgcgagtcacgacgctcttctctgctactatgcctccgcccgtc
gaacggcttgcgaagaagtacctaaagcggcctgctatcatcacgatcggtgaagccggt
cgcgctgtcgacactgtggaacagagagttgagttcgtcactggagacgaaaagaaaaag
caacgcatgctcgagatcctcaacagcggtcagtatgcgtctcccatcatcgcgttcgtc
aaccagaagaagacggcggatatggtcgccaaggatttacaacgcgctgggtggaacgca
gcgactctgcactcgggcaagaaccaagaacagcgggaagctgccttgcagtccctccgt
acaggagaagccgacattctcgtcgctaccgatcttgccggacgtggtatcgacgtgacc
gacgtcacattggttatcaactatcagatgtccaacacgatcgaggcctatgtgcaccgt
attggtcgcacaggtcgtgctggcaaacagggaacggcgattaccttcctgaccaatgat
gacgaggaggttatgtacgatctcaggcaagaaatctcgaagagtccagtgtccaaagtc
ccgccggagctggcgaaacacgaagctgcgcagcacaaagtttcaaaagagatgaagcgc
aagagggacgccgaggaccaaggctaa

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