Phanerochaete carnosa: PHACADRAFT_176005
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Entry
PHACADRAFT_176005 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PHACADRAFT_176005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_176005
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHACADRAFT_176005
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
PHACADRAFT_176005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
HHH_5
Cdd1
IMS_HHH
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
18909741
NCBI-ProteinID:
XP_007398282
JGI:
Phaca1_176005
UniProt:
K5UUC0
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPFKRPAAAYHESSGYSSGRSKPPETSPDVNVPSKRSKVRRSAKIFPSVKAYIVQAKMDG
PTIAELFMLAERHCERLCDYAEDADVIITSITMRRRLERHIYKAVVTPAWLRDSVAEGEA
LECTPYVALQDLREETINNCPVCNVRPCECEDTDVDEQAPGPETSYPSPPTPAPKSKLAV
AGPSTLARPIPSHLLPLAPPIPTELSKLRYASKYACQRASPLICLNQALAVELDIIKRSR
ALEGEERSALSYSRAISAIKAYPRRITSIRQVEELSHVGTIANSERFKALSLFSSIYGIG
PSTARRLYALGLRTVDDLEVYFGVEPEEEESQLVELEHHERFGRASESGLGETWIKIALG
LRNDFELMIPRAEVEEMGRVVMDELNIVEHGCVSTIVGGYRRGKPQSNDVDIVFTHPDPT
KSKGLCKRFVHHLHKKGMVTHVMHLSGFHGHNPLRTTHWDSLEKALTVFILPPSSPFYKG
TRRRMDLIFAQPEVYWCAVIGWSGSIMFQRDIRQWAKDKKGMKFDSSGITRRYDSKPFYP
KTEKEVFDLFGLEWVDPVWRNADV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcaagaggccagccgcggcataccatgagtcgtctggttactcgtctgggagg
tcaaaaccccctgagacatcaccagacgtgaatgtcccttcgaagaggtcaaaagtccgt
cgctcggcaaaaatctttccgagtgtcaaggcctacattgtgcaagcaaagatggatgga
ccaactattgcagagctgttcatgcttgccgagcgacactgcgaacgtctatgcgactac
gcggaagacgcggacgtgatcattacctccattacaatgcgtagaaggctggagagacac
atctacaaagccgtggtgacacctgcgtggttacgcgactcggtcgccgaaggggaggct
cttgaatgcacaccatacgttgctttgcaagacttgcgagaagagactatcaataactgt
cccgtttgcaatgtgcggccttgcgaatgcgaggacactgatgtcgatgaacaggcgcca
ggccccgaaacgagctacccttcgcctcccaccccagcgcccaagtcgaaactcgcagtg
gctggtccatccactcttgcgcgtcccattccttcccatttgcttccgcttgcacccccg
atacctaccgagttgtcgaaacttcgctacgcttcgaaatatgcttgtcagcgagcctcg
cctttgatctgtcttaaccaggcattggctgtcgagttggatataataaaacggagccgg
gctctggagggcgaggaacgcagtgccctgagctactcacgagctatcagcgccatcaaa
gcctacccacggcgaataacctccatccgccaagttgaagagctttcacacgttggcaca
atcgcaaactctgaacgcttcaaagctttgagcctgttctcatcgatctatggaatcggc
ccctcaaccgcacgccggctatatgcgctgggactccgcacggtagacgacctggaagtg
tactttggcgtagaaccagaagaagaggagagtcagctcgtcgagctcgaacaccatgag
aggttcggtagagcgagtgaatcgggcctaggggagacatggatcaagattgcgctgggt
ctcaggaatgatttcgagctgatgatcccgagagcggaagttgaggagatgggtcgggtc
gtcatggatgagctgaatatcgtcgaacacggatgcgtttcgaccattgtcggaggctat
cgacgaggcaagccacaaagcaacgacgtcgacattgtcttcacgcaccctgatccaacc
aaatccaaagggctctgtaagcgcttcgtccaccatctacacaaaaagggtatggtcacg
catgttatgcacctctcaggtttccacggacataatccgctccgaacaacgcattgggac
tcgctcgagaaagcgctcaccgtgttcatcctgcctccatcttcaccattctacaaaggt
acgcgacggcggatggaccttatctttgcgcagccagaggtgtactggtgtgcggtcatt
ggatggagcggctcgattatgttccagcgagatatcaggcaatgggcgaaagacaagaag
ggcatgaagtttgacagctctggaattacacgaagatacgactccaagccattctatcca
aagacggagaaggaggtcttcgatctctttgggctcgagtgggtagacccagtatggagg
aatgcagatgtttga
DBGET
integrated database retrieval system