Phasianus colchicus (Ring-necked pheasant): 116236043
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Entry
116236043 CDS
T07365
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04510
Focal adhesion
pcoc04512
ECM-receptor interaction
pcoc04518
Integrin signaling
pcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116236043 (COL6A3)
04518 Integrin signaling
116236043 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116236043 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116236043 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoc04147
]
116236043 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116236043 (COL6A3)
Exosome [BR:
pcoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116236043 (COL6A3)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116236043 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
116236043 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
116236043
NCBI-ProteinID:
XP_031460392
Ensembl:
ENSPCLG00000015400
LinkDB
All DBs
Position
Unknown
AA seq
2808 aa
AA seq
DB search
MRKHRHLPLAAILGLLLSGFCSVGAQQQAVIEVNKKDIVFLIDGSTALGTGPFNSIRDFV
AKIVQRLEVGPDLIQVAVAQYADTVRPEFYFNTHQNRKDVMANVKKMKLMGGTALNTGSA
LDFVRNNFFTSAAGCRMEEGVLPMLVLITGGKSMDAVEQAAAEMKRNRIVILAVGSRNAD
MAELQEIAHERDFVFNPNDFRLQFMQAILPEVLSPIRTLSGGMIIHETPSVQVTKRDIIF
LLDGSLNVGNANFPFVRDFVVTLVNYLDIGTDKIRVGLVQFSDTPKTEFSLYSYQTKSDI
IQRLGQLRPKGGSVLNTGSALNFVLANHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQI
SNDLARAGVLTFAVGVRNADKAELEQIAFNPRMVYFMDDFSDLTALPQELNKPITTYVSG
GVEEVPLAPTESKKDILFLIDGSANLLGSFPAVRDFIHKVISELNVGPDATRVAVAQFSD
NIQVEFDFAELPSKQDMLLKVKRMRLKTGKQLNIGVALDEAVRRLFVKDAGSRIEEGIPQ
FLVLLAAGKSNDEVERPSGALKDAGVVTFAIKAKNADLSELERIAYAPQFILNVESLPRI
SELQANIVNLLKTIQFQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVERVVESLDIG
RDKVRVAIVQYSNVIQPEFLLDAYEDKADLVRAIQALTIMGGSPLNTGAALDYLIKNVFT
VSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFL
PDFAISVPDFSQLDSVQQAVSNRVIRLTKKEIESLAPDLVFTSPSPAGVKRDVVFLVDGS
RYAAQEFYLIRDLIERIVNNLDVGFDTTRVSVVQFSEHPHVEFLLNAHSTKDEVQGAVRR
LRPRGGQQVNVGEALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEFPSVQVKQ
VGVAPLVIAKNMDPEEMVQISLSPDYVFQVSSFQELPSLEQKLLAPIETLTADQIRQLLG
DVPTIPDVSGEEKDVVFLIDSSDSVRSDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSN
NVFPEFYLKTHKSKNAVLQAIRRLRLRGGYPVNAGKALDYVVKNYFIKSAGSRIEDGVPQ
HLVVILGDQSQDDVNRPANVISSTSIQPLGVGARNVDRNQLQVITNDPGRVLVVQDFTGL
PTLERKVQNILEELPVPTTESPGYPGPGGKKQADIVFLLDGSINLGRDNFQEVLQFVYSI
VDAIYEDGDSIQVGLAQYNSDVTDEFFLKDYSSKPQILDAINKVIYKGGRVANTGAAIKH
LQAKHFVKEAGSRIDQRVPQIAFIITGGKSLDDGQGASMEVAQKGVKVFAVGVRNIDLEE
VSKLASESATSFRVSTAQELSELNEQVLVTLAAAMEEKLCPGTTDVTRDCDLDVILGFDV
SDVGAGQNIFNSQRGLESRVEAVLNRITQMQKISCTGSQAPNVRVAIMAQSRGGPVEGLD
FSEYQPELFERFQGMRTRGPYFLTAETLKSYQNKFRSAPSGSTKVIIHFTDGTDDYLDQM
KTASADLRRQGVHALLFVGLDRVKNFEEVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLD
NIAERTCCGVHCKCSGQRGDRGLPGPIGPKGATGDIGYGGYPGDEGGPGERGPPGVNGTQ
GFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGFSGRRGNKGAK
GERGERGDRGLRGDPGDSGADNTQRGTRGQKGEIGQMGEPGPVGQRGSDGGVGRQGMAGR
RGPIGVKGTKGALGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGVPGPRAGGGQPGAPGE
RGRIGPLGRKGEPGNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYPGPK
GGPGDRGGAGGPGPKGNRGRRGNAGNPGTPGQKGEIGYPGPSGLKGDKGPSISQCALVQN
IKDKCPCCYGPKECPVFPTELAFAIDTSSGVGRDVFNRMKQTVLRVVSNLTIAESNCPRG
ARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRA
RSGFLMRKVAVFFSNGETRASPQLNDAVLKLYDAGVTPVFLTSRQDAVLERALEINNTAV
GHAIVLPTGGSQLNDTIRRLLTCHVCLDVCEPDPICGYGSQRPVFRDRRAAPTDVDTDMA
FIMDSSASTTPLQFNEMKKYISHLVSNMEISSEPKKSQHHARVAVLQQAPYEHETNSSFP
PVKTEFSLTDYGSKQKIINYLHNQMTQLYGTMAMGSAVEHTVAHIFESAPNPRDLKVIVL
MITGKMEKQELEDLREAVIDAKCKGYLFVILGIGKNVDVKNIYSLASEPNDVFFKLVSKP
GELHEEPLLRFGRLLPSFIRSDFAFYLSPEIRKQCKWLQGDQTPKSPGHTGQKAVYVAPN
ATVTQTISTTTTLRTTIKPAASTTAHAKTTTASTTAQTRATERPTESTTVQVNATAQSQG
STAANTKATSRTTTSTTAAAASGRRRQGAKMNDIQITDVTENSARLRWASPEPHSAYVFD
LTITLAHDHSLVLKQNVTGTERVIGGLRSGQKYLVFITGYLKSQPKVSYTGTFSTKTPAQ
PQVALANMMLNTEPLEGPENDLADPCLLDFDMGMQCKDYQVVWFFDYKHKICSQGWYGGC
GGNANRFETEAECNSKCLKPSAAEKAMQQPPLEKRLSPVMDICLLQKDEGTCRDFVLKWH
YDLKTKSCARFWYGGCGGNENRFNTQKECEKACSPGNISPGVVTTIGT
NT seq
8427 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaccgacatttgcccctcgcggcaatacttggcctcctgctctcaggcttt
tgctcagttggtgcccagcagcaagcagttattgaagtgaacaagaaggatatagtcttc
ctgatagatggctcaacagctctggggactggcccctttaactcaattcgtgatttcgtt
gccaaaatcgtccaaaggctggaggttggacccgacctgatccaagtcgcggtggctcag
tacgcagacactgtgaggccagagttttattttaacacccatcagaacagaaaggatgtg
atggctaacgtgaagaaaatgaagctcatgggtggtacggccctcaacactggctcagca
ctggacttcgtgaggaacaacttcttcaccagtgctgccgggtgtaggatggaggaaggg
gtgctccccatgctggtactcatcactggtggtaagtccatggatgccgttgagcaagct
gcagcagagatgaaaaggaacaggatagtgatccttgccgttgggtcgagaaacgctgac
atggcagaactccaagaaattgctcatgagagagattttgtgttcaacccaaatgacttc
cgccttcagttcatgcaagccattcttcctgaggtgctgtcacccatccggacgctctct
ggaggaatgattatccacgaaacaccatcagttcaagtaaccaaaagggatatcatcttt
cttttggatggatcactcaacgtcggaaatgccaacttcccctttgtgcgggactttgtt
gtgactttagttaactaccttgatatcggaaccgacaaaatccgagttggcttagtgcaa
tttagcgacactcctaaaaccgagttctccctatactcataccaaaccaaatcagacata
atccaacgtttggggcagctgaggcccaagggtgggtcagtgctgaacactggctctgca
ctgaactttgtgcttgcgaatcacttcactgaagctggtgggagcagaataaatgaacaa
gtgccacaggtcctagtcctggtgacggcagggaggtctgctgatcccttcctgcaaatt
tccaatgacttagctcgggccggagtgctgacttttgctgttggagttaggaatgcggat
aaggcagagcttgaacagattgcgtttaacccaagaatggtatattttatggatgatttc
agtgatctgacagcattacctcaggagttaaataagcctataacaacatatgttagtgga
ggtgtggaggaggttccactcgccccaacagaaagcaagaaagacattttattcctgatt
gatggttcagccaacctcttgggtagctttcctgctgtccgggactttatacacaaagtc
atttctgaactgaacgtgggtcccgacgccacgcgagtagctgtggctcagttcagtgac
aacatccaagttgaatttgactttgctgaactcccatctaagcaagacatgcttctgaaa
gtgaaaaggatgaggttaaaaactgggaagcagctgaatatcggagtggcgctcgatgaa
gccgtgaggagactgtttgtgaaggatgctggaagtaggattgaagaaggcattcctcag
ttcttggtcctcctcgctgctgggaaatcaaacgatgaggtggagcgaccatcgggagct
ctgaaggatgctggagttgtgacctttgctatcaaagccaaaaatgctgatttatcagag
ctggaaaggatagcttacgccccacagttcattttgaatgtcgaatcccttcctcggatt
tcagagctccaggcaaacatagtgaacctactgaaaactatccagtttcagccaacagta
gttgagagaggtgagaagaaggatgtggtgtttctaatcgatggctcggatggcgtcagg
agaggtttccctctgctgaagacctttgtggaaagagttgttgaaagccttgatattggc
cgtgacaaggtccgcgtggccattgtgcagtacagcaacgtcatacaacccgagttcttg
ctggatgcctacgaagacaaagccgatttagtcagagccatccaggcactgacaattatg
ggaggatctcctctgaacaccggagcagccctcgactatctcatcaagaacgtgttcacc
gtgtcgagtggcagcaggatagctgagggcgtcccgcagttcctgatcctgctcactgct
gaccgatcccaggatgacgtgaggaggccctcggtggtcctcaagacgagcggcacggtg
ccctttggcatcgggattggaaatgctgacctcacagagcttcagacgatctccttcctc
ccagattttgctatctctgtacctgacttcagccagctggattcagtgcaacaggccgtg
tccaacagagtcatccgactgaccaagaaagaaatagagtcacttgcccctgatctggtt
tttacatcacccagcccagcgggcgtgaagagggatgttgtgttcctggtcgatggctcc
cgctatgccgcccaggagttctacctcatccgtgacctcattgagaggatagtgaacaac
ctggatgtgggctttgacaccacccgggtttcagtggtccagttcagtgagcatccccat
gtggagttcctactcaatgctcattccaccaaagatgaggtgcaaggtgcagtgaggcgg
ctgcggccgaggggtggccagcaggtgaacgtgggggaagcccttgaatttgtggcaaaa
accatcttcacccgtccctctgggagccgcatagaagagggtgtccctcagtttttggtt
atcctctcctcccgcaagtctgatgatgacttagaattcccatcggtgcaagtcaaacaa
gtaggagtggcacctctggtcatcgcaaagaacatggatcctgaggagatggtgcagatt
tcccttagccctgattacgtgttccaagtctccagcttccaggaactgcccagccttgaa
cagaagctgctggctcctattgaaaccctgactgcggaccaaatcagacaactcctggga
gatgtgccaacaattccagatgtttccggtgaggaaaaggatgtagtcttccttattgat
agctccgacagcgttaggtctgatgggcttgctcacattcgggatttcatcagcagaatc
gttcagcagcttgatgttgggccaaacaaagtacggattggagtggtccagttcagcaat
aacgtcttccccgagttctacctgaaaacccacaaatctaaaaacgccgtactgcaagcc
atccgccgcttacggcttagaggagggtaccctgtgaatgctggcaaagccctggactac
gtggtgaagaactacttcatcaagtccgcagggagcaggatagaagatggagtgccccag
catctagttgtcatccttggagatcagtcccaggatgatgtcaacaggcctgctaatgtc
atctcttcaacgagcattcaacctctgggtgttggagccaggaatgtagacaggaaccag
ctgcaggtcattaccaatgatcccggccgtgtgcttgtagtacaggacttcacaggactg
cctactttagaaagaaaggtgcagaacattcttgaagagcttccagtacctacaacagaa
agccccggatatccaggacctggaggcaaaaagcaggctgacattgtgtttttgctggat
ggctccatcaacctgggaagagataacttccaggaagttctccagtttgtgtattctata
gtggatgccatctatgaggatggtgactccatccaggtaggactggcgcagtacaactct
gatgtgaccgatgagtttttcctcaaggattactccagcaaacctcagattttagatgcc
atcaacaaagtgatctacaaaggtggccgagtggcaaacactggtgcagccatcaagcac
cttcaggcaaaacactttgtaaaggaggccggaagccgaattgaccagagggtgcctcag
atcgccttcatcatcacaggggggaaatctttagatgatgggcagggtgcctccatggaa
gtcgcacagaaaggtgtcaaggtgtttgcagttggtgtaaggaacatcgacttggaggag
gtcagcaagttggccagcgagagtgccacgagcttcagagtgtcgacagctcaggagttg
tctgaactgaatgagcaggtcttggttacattggcagctgctatggaggagaaactgtgc
ccaggaacaacagatgtgacaagagactgcgacttagatgtgattcttggcttcgatgtg
tcagatgtcggagccggccaaaacatcttcaattcccagagagggctggagtccagggtc
gaggctgtgctgaacagaataacacagatgcagaaaatcagctgtaccggcagccaggcg
cccaacgtcagggtggccatcatggcccagtcccgggggggacccgtggagggattggac
ttttctgagtaccagcctgagctctttgagaggttccaaggcatgcgcacccgtggaccc
tatttcctcacagctgagacgctgaaatcctaccagaacaagttcagatcagcaccctct
ggcagcaccaaggtgataatccattttacggatggtacggacgactacttggatcagatg
aagactgcctcggctgatttgcgtagacaaggtgtccacgctctcctcttcgttggcttg
gatcgagtgaaaaactttgaggaagtgatgcagctggagttcgggaggggtttcacctac
aacaggccgctgagagttaatctcctggacttggatttcgagttggcagagcagcttgat
aacattgcagaaaggacgtgctgtggggtccattgcaagtgctcagggcagagaggggac
agaggtcttcctggccccataggaccaaagggtgctacaggtgacattggctacggaggc
tatcctggtgatgaaggaggaccgggtgagcgtggacctccaggagtgaacgggacacag
ggcttccagggatgccctgggcacagaggaaccaagggttctcggggattcccaggagag
aagggcgaactgggagaaatgggtctggatggcattgatggagaagagggagacaaaggc
ttgcctggttcctccggagagaaggggttctctggcaggaggggtaataaaggagccaaa
ggtgaacgaggagagcgaggtgaccgtgggctccgtggagacccgggagattcgggagca
gataatactcagcggggaaccagaggccaaaagggtgaaatcggacaaatgggagagcct
ggacctgtggggcagagaggctcagatggaggagtcgggaggcagggcatggcaggacgc
agggggccaataggagtcaagggcaccaagggtgcgctcggccagccagggccagctgga
gaacaaggcatgagaggaccacagggcccacccggccagattggcactccaggcatcagg
ggagagcaaggtgtccccggacccagggctggtggtgggcaaccaggagcaccaggagaa
aggggcaggattggcccgctgggacgaaagggtgagcctggaaatcctgggcccagggga
ccgaatggacagcaaggcccacgaggagagatgggtgatgacggacgagatggaattggt
ggcccaggtcctaaaggcagaaagggagaacgtggcttcattggctacccaggacccaag
ggtggacctggtgaccgtggtggtgctggaggccccggacctaaaggaaacagaggccgc
agaggaaacgctggaaatcctggcacacctggtcagaagggagagattggataccctgga
ccatctggacttaagggtgataaaggaccatccatcagtcaatgtgctctggtgcagaac
atcaaagataaatgcccttgctgctatggtcccaaggagtgccctgtcttcccaaccgag
ctggccttcgctattgacacctcctcaggtgtcgggagggatgtcttcaacaggatgaag
caaacggtgctcagagtggtcagcaacttaaccattgctgagagcaactgccctcgaggt
gcccgcgtggccctggtcacctacaacaatgaggtcaccacggagatccgctttgctgat
gccaggaagaaatccagcctcctccagcagatccaaaacttccaggcaaccctgaccaca
aagccacgcagcctggagactgccatgtcctttgtggccaggaacaccttcaagcgtgcc
cgaagtgggttcctcatgaggaaggtggctgtctttttcagcaacggggagacgagagcc
tccccgcagctcaacgatgccgtgctgaagctctacgatgctggggtcactcctgtgttc
ctcaccagcaggcaggatgcggttctcgaaagagctctggagatcaacaacacagcagtt
ggacacgcgatcgttcttccaactggaggcagccagctgaacgacaccatccgcaggctc
ttgacttgtcatgtttgtctggatgtgtgtgaacccgatcccatctgtggttacggcagt
caaagacctgtattcagagacagaagggcagccccgacagatgtagacactgacatggcc
ttcatcatggatagctcagcctccaccacacctctgcagttcaacgagatgaagaagtac
atttcccacctcgtgagcaacatggaaatcagctctgagccaaaaaaatctcagcaccat
gcaagagtggcagttctccagcaagctccttacgaacacgaaaccaactcaagcttccca
ccagtgaaaacagagttttcattaactgattatggatccaaacagaagatcattaattac
ttgcacaaccaaatgactcagctgtatggcacaatggctatgggaagtgcagtagaacac
acagtggctcatatttttgaaagcgcaccaaaccctcgggatctcaaagtcatagttctt
atgataactggaaaaatggaaaaacaagaacttgaggacttgcgggaggctgtgattgat
gcgaagtgcaaaggatacttgtttgttatcttgggcattggcaagaatgtggatgtcaag
aatatctacagcctcgctagtgagccaaatgacgtgttcttcaaattggtctctaaaccc
ggagagcttcatgaagaacccttgctacgctttgggagactgctgccatcttttatcaga
agtgactttgctttctacctatctccagaaataaggaaacagtgcaagtggcttcagggt
gatcaaacacccaagagccctgggcacaccggacaaaaagcagtatacgtggcccccaat
gcaaccgtaacccaaaccataagcaccaccaccacgctaagaaccaccatcaagcctgct
gcaagcaccactgcccatgccaagaccaccactgccagcaccacggcccagaccagagcc
acagagaggcccacagagagcactactgtccaggtgaatgctactgcacagagccaagga
agcactgctgccaacaccaaagccaccagccgcaccacaacgagcaccacggctgcagca
gcgagtggcaggaggagacaaggtgcaaagatgaatgacatccagatcacggatgtcacc
gagaacagcgccaggctgcgttgggccagccctgagccacacagcgcctacgtgtttgac
ctcaccatcaccttagcacacgaccactctcttgtgctgaagcaaaacgtcaccggcacc
gaacgtgtcattgggggcctcagaagtggacagaaatacctcgtcttcattaccggctac
ctgaaatcccagcccaaagtgagctacacggggacattcagcacaaagaccccagcacag
ccccaagtggccctggccaacatgatgctgaacactgagccactggaagggcctgaaaac
gatttggcagacccttgcttgctggactttgacatgggcatgcagtgcaaggactatcag
gttgtgtggttctttgactacaaacacaagatctgcagccagggttggtatggtggctgt
ggtggtaatgccaatagatttgagaccgaagctgagtgcaatagcaaatgcttgaaacca
tcagcagctgagaaagccatgcagcagccaccccttgagaaaaggttatcgccagtcatg
gacatctgcctgttgcagaaggacgaggggacctgcagggactttgtgctgaagtggcac
tacgacctgaagaccaagagctgtgctaggttctggtacggcggctgtggaggcaacgag
aacagattcaacacacagaaagaatgtgaaaaagcctgcagccccggtaacatcagccct
ggcgtggtgacgacgataggaacatag
DBGET
integrated database retrieval system
