Pseudomonas coronafaciens pv. oryzae: POR16_12935
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Entry
POR16_12935 CDS
T08147
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02010
ABC transporters
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
POR16_12935
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_12935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_12935
Transporters [BR:
pcof02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
POR16_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QGL57181
LinkDB
All DBs
Position
complement(2859997..2861001)
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AA seq
334 aa
AA seq
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MPDAVPTFKSIRLPAVWRALALTLIAASLAATARADDSDVPSLAGKRIAISMTGTSHYFD
IKTFQAQVDEVKRLGGTPITLDAGRNDKNLVNQLQTVVTQKPDAVIQTLGTLSVIDPWLK
RISKAGIPLFTIDAPSQYSLNNTTSDNMATGKALAGQLIKDAGGKGNVLVFNGFYGVPVC
AIRYDQLKLALKDQPEMNIIEPELRDVIPNTVQDAYSQVSALLNKYPKGSISAIWAAWDI
PQLGASKALVDAGRTEIKTYGVDGTPEVLELMRREDSPIGAVVAQQPVLIGKTAVQNVAR
YLAGQRDLPKETQVPTLLTTAANLPEVQKLRGDN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgccgtcccgactttcaaatcgattcgattgcctgccgtatggcgcgccctt
gcgctgaccctgattgctgccagccttgctgcaacggcccgcgccgacgacagcgacgtg
ccctcactggcgggcaaacgcattgctatcagcatgaccggcaccagtcactatttcgat
atcaagacctttcaggcccaggtcgatgaggtcaagcgtttggggggcacgccgatcacc
ctcgacgccggtcgcaacgacaagaacctggtcaatcaactgcaaaccgtggtcacgcaa
aagcccgatgccgttatccagactctgggcacgctcagcgtgatcgatccttggctcaag
cgcatcagcaaggcgggcattccgttgttcaccattgatgcgccatcgcagtacagcctc
aataacaccacttccgacaacatggcgacgggcaaggcgctggccgggcaactgattaaa
gatgcaggcggaaagggcaatgtgctggtgttcaacggtttttatggcgtgccggtctgc
gccatccgctacgaccaactcaagctggcactcaaggaccagcctgaaatgaacatcatc
gagcccgagttgcgtgatgtgatccccaataccgtccaggacgcctattcacaggtgtcg
gcactgctcaataagtaccccaaaggcagcatatcggccatctgggccgcttgggacatt
ccgcagttgggtgccagcaaggcgctggtcgatgcagggcgaaccgagatcaagacctac
ggtgtagatggcaccccggaagtgctggagctgatgcgccgtgaagactcgccgataggg
gccgtggttgcacagcaaccggtactgatcggcaagactgctgtgcagaacgtcgcccgc
taccttgccgggcagcgcgatttgcccaaggaaacccaggtgccgacgctcctgaccact
gccgccaacctgccagaagtgcaaaagcttcggggcgataactga
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