Pseudomonas coronafaciens pv. oryzae: POR16_21890
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Entry
POR16_21890 CDS
T08147
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03030
DNA replication
pcof03430
Mismatch repair
pcof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POR16_21890 (ssb)
03430 Mismatch repair
POR16_21890 (ssb)
03440 Homologous recombination
POR16_21890 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcof03032
]
POR16_21890 (ssb)
03400 DNA repair and recombination proteins [BR:
pcof03400
]
POR16_21890 (ssb)
03029 Mitochondrial biogenesis [BR:
pcof03029
]
POR16_21890 (ssb)
DNA replication proteins [BR:
pcof03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
POR16_21890 (ssb)
DNA repair and recombination proteins [BR:
pcof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
POR16_21890 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
POR16_21890 (ssb)
Mitochondrial biogenesis [BR:
pcof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
POR16_21890 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
DUF6264
Motif
Other DBs
NCBI-ProteinID:
QGL58799
LinkDB
All DBs
Position
complement(4836333..4836899)
Genome browser
AA seq
188 aa
AA seq
DB search
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMF
GKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQ
QGQGGGNYNQSAPRPQPSRPQQSAPQQSAPQQNYNQQPPQQRDSRPAPQQQAPQPAADFD
SFDDDIPF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtggggttaacaaagtcatattggtcggtacatgcggccaggatcccgaagtt
cgctacttgcctaacggtaacgccgtgaccaacctgagtctggcaaccagcgaacaatgg
actgacaagcagaccggccagaaggtcgaaaagaccgaatggcaccgtgtttcgatgttc
ggcaaggttgccgaaatcgccggcgaatacctgcgcaagggttcgcaggtgtacatcgaa
ggcaagctgcaaacccgcgagtgggaaaaagacggcatcaagcgctacaccactgaaatc
gtcgtagacatgcaaggcaccatgcagctgctgggtggccgtccacagggcgacgctcaa
cagggccagggtggcggcaactacaaccagtctgcacctcgtccacagccgtcgcgcccc
cagcaatcggcgccgcagcagtccgcacctcagcaaaactacaaccagcagccgccacag
caacgcgactcgcgtcccgcgccgcaacagcaagcgccgcagccagctgccgatttcgac
agctttgatgacgatattccgttctag
DBGET
integrated database retrieval system
