KEGG   Proteus columbae: F1325_01210
Entry
F1325_01210       CDS       T06419                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pcol  Proteus columbae
Pathway
pcol02024  Quorum sensing
pcol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F1325_01210 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F1325_01210 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcol03019]
    F1325_01210 (hfq)
   03036 Chromosome and associated proteins [BR:pcol03036]
    F1325_01210 (hfq)
Messenger RNA biogenesis [BR:pcol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     F1325_01210 (hfq)
Chromosome and associated proteins [BR:pcol03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    F1325_01210 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 6TM_1st_PGAP2IP
Other DBs
NCBI-ProteinID: QHN09160
UniProt: A0A6I7D6I8
LinkDB
Position
238269..238556
AA seq 95 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNTGTNQTGTGYNGGAAQQDDVAE
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatcctttcttgaacgcattacgtcgtgaaagggtt
cccgtttctatctatttggtaaacggcattaaattgcagggtcagatcgaatcttttgac
caatttgttattttgctgaaaaacacagtaagtcagatggtatacaaacatgctatctct
accgtggtaccttcgcgtcctgtttctcatcatagcaatacaggtacgaaccaaactggt
acaggctacaatggtggcgctgctcagcaggatgatgttgcagagtaa

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