Proteus columbae: F1325_04485
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Entry
F1325_04485 CDS
T06419
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcol
Proteus columbae
Pathway
pcol00300
Lysine biosynthesis
pcol00470
D-Amino acid metabolism
pcol01100
Metabolic pathways
pcol01110
Biosynthesis of secondary metabolites
pcol01120
Microbial metabolism in diverse environments
pcol01230
Biosynthesis of amino acids
Module
pcol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pcol_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1325_04485 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F1325_04485 (lysA)
Enzymes [BR:
pcol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F1325_04485 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QHN09765
UniProt:
A0A6I7D4N4
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All DBs
Position
963572..964813
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AA seq
413 aa
AA seq
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MTTSITMAQYQLAQTYGTPLWIYQGDTISQRIAQLKSFDVVRFAQKACSNIHILRLMKAQ
GVKVDSVSLGEIERALVAGYQGGREKSEIVFTADLLDERTIERVVELDIPVNAGSIDMLR
QLGERNQGHAVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVIQQYNLTLVGF
HMHIGSGVDYQHLSSVCDAMVEQVLTSQVDIQAISAGGGLSTPYQEGDAIVDLDHYFSLW
DKARQRIAQQLGHSVELEIEPGRFLVAESGVLISQVRAVKSMGSRHYVLVDAGFSDLMRP
AMYGSYHQISVLDSHGQIKPMTELQETIVAGPLCESGDVFTQQEGGTVVPRLLPQAQVGD
YLVIHDTGAYGASMSSNYNSRPLIPEVLITEGVPQLIRRRQTIEELLALELDL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcaataactatggctcaataccaattagcacaaacttatggaacgccatta
tggatttatcagggcgatacgatttctcagcgtattgctcagcttaaatcttttgatgtg
gttcgttttgctcaaaaagcctgctccaatattcatatcttacgtttaatgaaagcacag
ggtgttaaagttgactctgtttcattaggagagattgaacgtgctttagttgcgggttat
caaggaggtagagaaaaaagtgagattgtctttacggctgatttacttgatgaaagaacc
attgagcgtgttgttgaattagatattcctgttaatgctggctccattgatatgcttcgt
caattaggtgaacgcaatcaagggcatgcggtttggataagaattaatcctggatttggt
catggacatagccaaaaaaccaatacaggcggagaaaacagtaagcatggtatttggtat
gaagatgtgcctgaagcgttagccgtgatccaacaatacaatttaacgctagttggtttt
catatgcatattggctctggtgttgattatcaacacctttctagtgtctgtgatgcaatg
gtagagcaagtgcttacctctcaagttgatattcaggctatttcggcaggaggcggattg
tcaacgccttatcaagagggtgatgcgatagtcgatttggatcactatttttctttatgg
gataaggctcgtcagcgtattgcacagcagttaggacattctgttgagttagaaatcgag
ccaggacgttttttagtggctgagtcaggggtattgatttcacaagtgagagccgttaaa
tcaatgggaagtcgtcattatgtgctggtggatgctggatttagtgatttaatgcgccct
gcaatgtatggcagttatcatcaaatttcagttttagatagccatggtcaaataaaacca
atgacagaattacaagagacgattgtggctggtcctttgtgtgaatctggagatgttttt
actcagcaagagggaggcactgttgttcctcgtttattacctcaagcacaggtaggtgat
tatttagttattcatgatactggcgcttatggtgcttcaatgtcatcaaattataatagc
cgaccacttattcctgaagtgttgataacagagggcgttccccaattaattcgtcgtcgt
caaacaatagaagagttattagcgttggaattagatctctaa
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