Pandoraea commovens: NTU39_11030
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Entry
NTU39_11030 CDS
T08365
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pcom
Pandoraea commovens
Pathway
pcom02024
Quorum sensing
pcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTU39_11030 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_11030 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcom03019
]
NTU39_11030 (hfq)
03036 Chromosome and associated proteins [BR:
pcom03036
]
NTU39_11030 (hfq)
Messenger RNA biogenesis [BR:
pcom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NTU39_11030 (hfq)
Chromosome and associated proteins [BR:
pcom03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NTU39_11030 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UVA81494
UniProt:
A0A5E4W334
LinkDB
All DBs
Position
2359975..2360211
Genome browser
AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttc
gaccagtatgtcgtcctgctgcgcaacacggtcactcaaatggtttacaagcatgccatt
tcgacggtcgtgcctgcgcgtccggtgaatttccatccggaagccgagcagtcctga
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