Pandoraea commovens: NTU39_24160
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Entry
NTU39_24160 CDS
T08365
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTU39_24160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_24160
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NTU39_24160
DNA repair and recombination proteins [BR:
pcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NTU39_24160
Prokaryotic type
NTU39_24160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UVA79066
UniProt:
A0A5E4YES3
LinkDB
All DBs
Position
5366454..5367341
Genome browser
AA seq
295 aa
AA seq
DB search
MASRSRTATAQNADEARQGSLFGETNGTNGTNGTNGTNETGETGDTRSDSPVTVAGPLKG
RVEDQFAALPDAWKTLVAPFVQSAAYAPLCQYVDAEVAAGKTVYPADIFHALRMTSPKDV
KVVILGQDPYHGDDNGIAQAHGMAFSVQRGVRVPPSLRNIYKEIERDLGIAPPSHGNLDA
WAKQGVLLLNTTLTVEAANAASHAKPFKKGGWQACTDTLLCGLAEQQGPLVFLLWGSHAQ
AKAPLLNGHGHLLLEAPHPSPLSAHRGFLGCGHFSAANAFLEKHGKTPIDWQVPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgctcacgaactgcaaccgcccagaacgccgacgaggcgcgacaaggctct
ctcttcggcgagacgaacggtacgaacggtacaaacggtacaaacggtacaaacgagacg
ggcgagacgggcgacacccggagtgacagtcccgtcaccgtggccggtccgttgaagggc
cgcgtcgaagaccagttcgctgcgctgcccgacgcgtggaaaacgctggtcgccccgttc
gtgcagagcgccgcttacgccccgctgtgccaatacgtcgacgccgaagtcgcggcgggc
aagaccgtctatccggcggacattttccatgcgctgcgcatgacgtcgccgaaggacgtg
aaagtcgtcatccttggacaggacccgtatcacggcgacgacaacggcattgcgcaggcg
cacggcatggcgttttcggtgcagcgcggcgtgcgcgtgccgccgtcgttgcgcaacatc
tacaaagagatcgaacgggatctgggtatcgcgccgccgtcgcatggcaacctcgacgcc
tgggcgaaacagggcgtgctgctgctgaacacgacgctcaccgtcgaagccgccaatgcc
gcgagccacgcgaagcccttcaagaaaggcggatggcaagcctgcacggacaccttgctc
tgcggcctcgccgaacagcaaggcccgctggtgttcctgctgtggggtagtcatgcgcag
gcgaaagcccccctgctcaacggtcacggccatctgctgctcgaagcgccgcacccttcc
ccgctatcggcccatcgcggcttcctcggctgcggccacttcagcgccgccaacgctttc
ctcgaaaagcacggcaagacgcccatcgactggcaggttccggcgtag
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