Paracoccus contaminans: B0A89_01930
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Entry
B0A89_01930 CDS
T04876
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pcon
Paracoccus contaminans
Pathway
pcon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0A89_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcon03021
]
B0A89_01930
03400 DNA repair and recombination proteins [BR:
pcon03400
]
B0A89_01930
Enzymes [BR:
pcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0A89_01930
Transcription machinery [BR:
pcon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0A89_01930
DNA repair and recombination proteins [BR:
pcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0A89_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ARJ68585
UniProt:
A0A1W6CUS8
LinkDB
All DBs
Position
complement(398247..402488)
Genome browser
AA seq
1413 aa
AA seq
DB search
MNQELSTNPFNPITPARQFDEIKISLASPEEILAWSFGEVKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGLVCEKCGVEVTLQKVRRERMGHIELASPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLSYGQLLTEEEYMDAQDQFGVDAFT
ANIGAEAIREMLAAIDLQATADQLREDLKEATGELKPKKIIKRLKIVESFLESGNRPEWM
VMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGYSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMQREGMKGEGMAFANVEEVEHAL
AAGEVHLHARITARIPQIDEDGNEVLRRYETTPGRLRLGALLPRNAKAPFDLVNRLLRKK
DVQNVIDTVYRYCGQKESVIFCDQIMSMGFREAFRAGISFGKDDMVVPDNKWTIVEEVQD
QVKEFEQQYLDGLITQGEKYNKVVDAWSKCNDRVTEAMMAAIAAPRKDESGAEVEPNSVY
MMAHSGARGSTSQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIIREHDCGTERAITASAAVNDGEVISPLAERVLGRV
AAEDILVPGSGEVILRRNELIDERRADAIEAAGVQTVRIRSALTCEAEDGVCALCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFIAANQEGTVRFENEA
VLENANGELIVMSRSMQLHVMNEQGTALASHKLFYGSKLLVRGGDKVTRGQKLFEWDPYT
LPIIAEQGGTARFVDLVSGLSVREDTDEATGMTQKIVTDWRSAPKGNDLKPEIILMGADG
EPVRNEAGNPLSYPMSVDAILSVEDGQEVKAGDVLARIPREGARTKDITGGLPRVAELFE
ARRPKDHAIIAEMDGTVKFGKDYKNKRRIIVQPAAEGLEPVEYMVPKGKHIPVQEGDFVQ
KGDYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIE
ILDSGDTTLLKGEHVDREEFVEENTKVEARGGRPATGEPVLLGITKASLQTRSFISAASF
QETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATARINRIAEDRDAEVIEMRRA
EAEAAAALSPPPVQSAPEVLAMNIDDVITSPEE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacttagcaccaatcccttcaacccgatcaccccggcgcggcagtttgac
gagatcaagatctcgctcgcctcgcccgaggagatcctcgcctggtccttcggcgaggtg
aagaagcccgaaacgatcaactaccgcaccttcaagcccgaacgcgacgggctgttctgc
gcgcgcatcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatg
aagtatcgcggccttgtctgcgagaaatgcggtgtcgaggtgacgctgcagaaggtgcgc
cgcgagcgcatgggccatatcgagctggcctcgccggtcgcccatatctggttcctgaaa
tcgctgcccagccgcatcggcctgatgctggacatgacgctgcgcgatctggaacgcatc
ctgtattttgaaaactacgtcgtcatcgaaccaggtctgacggacctgtcctacggtcag
ctgctgaccgaggaagaatacatggacgcgcaggaccagttcggggtggatgccttcacc
gccaatatcggtgccgaggcgatccgcgaaatgctggccgccatcgacctgcaggcgacg
gccgatcagctgcgcgaagacctgaaagaggccacgggcgagctgaagccaaaaaagatc
atcaagcggctgaagatcgtcgaaagcttcctggaatcgggcaaccgtcccgaatggatg
gtgatgaccgtcatcccggtcatcccgccggaactgcgcccgctggtcccgctggacggg
ggccggttcgcgacctcggacctgaacgatctttatcgccgggtcatcaaccgcaacaac
cgcctcaagcggctgatcgagctgcgtgcgcccgacatcatcgtgcgcaacgaaaagcgg
atgctgcaggaatcggtggacgcgctgttcgacaacggccgccgcggccgcgtcatcacg
ggcaacaacaagcgcccgctgaaatcgctgtccgacatgctcaagggcaagcagggccgg
ttccgccagaacctgctgggcaagcgggtggacttctcgggccgctcggtcatcgtgacc
gggccggaactgaagctgcatcagtgcggcctgcccaagaagatggcgctcgaactgttc
aagccgttcatctattcgcggctcgaggcgaagggctattcctcgaccgtcaagcaggcc
aagaagctggtcgagaaggaacgccccgaggtctgggacatcctggacgaggtgatccgc
gaacatccggtgctgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttc
gagccgatcctgatcgagggcaaggcgatccagttgcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggccgtgcacgtgcccctttcgctggaagcccag
cttgaagcgcgcgtgctgatgatgtccacgaacaacgtgctgtcgcccgccaacggcgcg
ccgatcatcgtgccgtcgcaggacatggtgctgggcctctactacaccaccatgcagcgc
gagggcatgaagggcgaaggcatggcctttgccaatgtcgaggaggtcgagcacgccctt
gccgccggcgaggtgcatctgcatgccaggatcaccgcgcgcatcccgcagatcgacgag
gacgggaacgaggtgctgcggcgctacgagacgacgccgggccgcctgcggctgggcgcg
ctgctgccgcgcaacgccaaggctccgttcgatctggtcaaccgtcttctgcgcaagaag
gacgtgcagaacgtcatcgacaccgtctaccgctactgcgggcagaaggaatcggtgatc
ttctgcgaccagatcatgtcgatgggcttccgcgaggcgttccgcgccggcatctcgttc
ggcaaggacgacatggtggttcccgacaacaagtggaccatcgtcgaggaagtccaggat
caggtgaaggagttcgagcagcagtatctcgacggcctgatcacccagggcgagaaatac
aacaaggtcgtggacgcctggtccaagtgcaacgaccgcgtgaccgaggcgatgatggcc
gccatcgccgccccccgcaaggatgagtcgggcgccgaggtcgaaccgaacagcgtctac
atgatggcccattcgggcgcgcgcggctcgaccagccagatgaagcagctgggcgggatg
cgcgggctgatggccaagccctcgggcgagatcatcgagaccccgatcatctcgaacttc
aaggaagggctgacggttctcgaatacttcaactcgacccacggggcgcgcaagggtctg
tccgacaccgcgctcaagacggcgaactcgggctatctgacgcggcgtctggtggacgtg
gcgcaggactgcatcatccgcgagcatgactgcggcaccgaacgggcgatcacggcctcg
gccgcggtcaatgacggcgaggtgatctctcctcttgccgaacgcgtgctgggccgcgtc
gcggccgaggacatcctcgttcccggttcgggcgaggtgatcctgcgccgcaacgagctg
atcgacgaacgccgcgccgacgccatcgaggcggcgggcgtgcagaccgtccgcatccgc
tcggccctgacctgcgaggccgaggacggcgtctgcgcgctgtgctatgggcgcgatctt
gcccgcggcacgctggtcaatatcggcgaggcggtgggcatcatcgccgcccagtcgatc
ggcgagccgggcacgcagctgacgatgcggaccttccacatcggcggcatcgcccagggc
gggcagcagtccttcatcgccgcaaaccaggaaggcaccgtccggttcgagaacgaggcc
gtgctggagaacgccaatggcgagctgatcgtcatgagccggtcgatgcagctgcacgtg
atgaacgagcaggggaccgcgctggccagccacaagctgttctacggctcgaaactgctg
gtgcggggcggtgacaaggtcacccgtgggcagaagctgttcgaatgggatccctatacc
ctgccgatcatcgccgagcagggcgggaccgcgcgcttcgtcgatctcgtttcgggcctg
tcggtccgcgaggataccgacgaggccaccggcatgacccagaagatcgtgacggactgg
cgctcggcccccaagggcaatgatctcaagcccgagatcatcctgatgggcgcggatggc
gagccggtgcgcaacgaggcgggcaacccgctcagctatccgatgtcggtcgatgccatc
ctgtcggtcgaggacgggcaggaggtcaaggccggcgacgtgctggcgcgtatcccgcgc
gagggtgcccggaccaaggacatcaccggcggtctgccccgcgtggcggaactgttcgag
gcgcgccgtcccaaggaccacgcgatcatcgccgagatggacggcacggtgaagttcggc
aaggactacaagaacaagcggcggatcattgttcagcccgccgccgaaggtcttgagccg
gtcgaatacatggtgcccaagggcaagcacatcccggtgcaggaaggcgacttcgtgcag
aagggtgactacatcatggacggcaaccccgcgccgcacgatatcctgcggatcatgggg
atcgaggcgctggccgattacctgatcgacgaggtgcaggacgtctatcgcctgcagggc
gtgaagatcaacgacaagcacatcgaggtgatcgtccggcagatgctgcagaagatcgag
atcctcgattccggcgacacgaccctgctcaagggcgagcacgtggaccgcgaggagttc
gtcgaggaaaacaccaaggtcgaggcacgcggcggtcgcccggcgacgggggaacccgtg
ctgctgggcatcaccaaggccagcctgcagacccgctcgttcatctcggccgcatcgttc
caggaaacgacccgcgtgctgaccgaggcggcggttcaaggcaagcgcgacaagctggtg
ggcctgaaggagaacgtgatcgtcgggcgcctgatcccggcgggcacgggcggggccacc
gcgcgcatcaaccgcatcgccgaggatcgcgacgccgaggtgatcgagatgcgccgggcc
gaggccgaggcggctgccgcgctctctccgcctccggtccagtcggcgcccgaggtgctg
gcgatgaacatcgacgatgtgatcacctcgcccgaggaatga
DBGET
integrated database retrieval system
