Puma concolor (puma): 112863469
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Entry
112863469 CDS
T08890
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112863469 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112863469 (PAN2)
Enzymes [BR:
pcoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112863469 (PAN2)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112863469 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
112863469 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
VPS11_N
Motif
Other DBs
NCBI-GeneID:
112863469
NCBI-ProteinID:
XP_025782369
UniProt:
A0A6P6I3K6
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDESEDMHSLLLTDNSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRSFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPIGREE
ELHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEGSNSDKTGKNCDFAQVLKRSICLEQNTQAWCD
NCEKYQPTIQTRNIRHLPDILVINCEVNSLKEADFWRMQAEVAFKMAIKKHGGEISKNKE
FALADWKELGSPEGVVMCSSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEIQWGPAR
AEEEHGVFVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEP
IDKHEAVQFDMNWKVPAILYYVKRNLNSKYNLNIKNPIEASVLLAEASLARKQRKTHTTF
IPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE
GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV
GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA
RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL
AL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgagggtctggaccctggactggcagagtatgccccggccatgcattctgcc
ctggaccctgtcctggatgcccacctgaacccaagtctgctacagaatgtggagctggat
ccggagggggtggccttggaggctcttcctgtccaggagtcagtgcacataatggaaggt
gtctactctgaattgcacagtgtggtggctgaagtgggtgtgcctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggaagccatgggggccatgccacttcattt
tttggccccgccttggagcgttactcatcctttcaggtcaatggcagtgatgacattcga
cagatccagagcctggaaaatggtatcctatttctcaccaagaacaacctcaagtatatg
gcccgtgggggcctcattatatttgattacctgctggatgagagtgaggatatgcacagt
ctcctactgactgacaacagcactctgcttgttggtgggctgcagaaccacatattggaa
attgaccttaatactgtccaggagactcagaagtatgcagttgagacgcctggagtcacc
attatgagacagacaaatcgcttcttcttctgtggccacacatctggcaaggtttccctg
cgagacctccgttcttttaaggtggagcatgagtttgatgctttctcaggaagtctgtca
gattttgatgtgcatggcaacctgctggccgcctgtggcttctccagccgcctcactggc
ctggcctgtgaccgtttcctcaaggtgtatgatctgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcatccctacatatacttctcgactt
gctatcatctcccagtcagggcagtgccagttttgtgagcccacaggcctggccaaccca
gcagacatctttcatgtgaatcctgtggggcctctgctaatgacatttgacgtatcagcc
agcaagcaggccctggcctttggggattctgagggctgtgtacacctctggactgattcc
cctgagccttccttcaacccttactcccgtgagacggagtttgctttgccctgtctcgtg
gactcactgcctcctctggactggagccaggacctgctgcctctttccctcatccctgtc
ccgctcaccactgacacacttctctctgactggcctgctgccaactccgctccagctccc
aggcgagcaccccctgtggatgcagagattctacgcaccatgaagaaggtgggcttcatt
ggctatgcacccaacccccgcaccaggctgcgcaatcagattccttatcgactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccgatagggcgggaagag
gagctacatctccacatggtctctaagaaataccgcaaggtaaccatcaaatactccaag
ctagggctggaggactttgacttcaaacactacaataagaccctgtttgctggattagag
ccccacatccccaatgcctactgtaactgcatgatccaggtgctctattttctggagccc
gttcgctgtcttatccagaaccatctttgccagaaggagttctgtctggcatgtgagctg
ggtttcctcttccacatgttggatctttctcgaggtgacccttgtcagggcagtaatttt
cttcgggcattccgcaccattcctgaggcctcggcccttggtctgatcctggctgactca
gatgaggcttcaggcaaaggcaatctggccaggcttattcagaggtggaatcgcttcatt
ctcactcaactgcatcaggatatgcaggagctagaagtaccccaggcttatcgaggtgct
ggaggcagcagcttttgttcatcgggggactctgtcattgggcagctgttcagctgtgag
atggagaattgcagcctctgccgctgcggcagtgagaccgtgcgagcctcttccaccctg
ctcttcacgctctcctaccccgagggtagcaacagtgataaaaccgggaagaactgtgac
tttgctcaggtgctgaagcgaagcatctgcctggagcagaatacacaggcctggtgcgac
aactgcgagaagtaccagcccacgattcagacccgcaacatccgccatctgccagatatt
cttgttatcaactgtgaggtgaacagcttgaaagaagctgatttctggagaatgcaggct
gaggttgccttcaagatggcaataaaaaagcatggtggggaaatctctaagaataaagag
tttgctttggctgattggaaggaactagggagtccagagggcgtggtgatgtgttcctcc
attgaggagttgaagaatgtctggcttcctttctccattcgcatgaagatgaccaagaat
aaagggctggatgtttgcaattggactgatggggatgagatacagtggggcccagccagg
gcagaggaggagcatggtgtctttgtgtatgacctgatggctactgtggtacacatcctg
gactcacgcacagggggcagcctggtggctcacatcaaagtcggagagacctaccaccag
cgcaaggagggtgttacccaccagcagtggtatctcttcaatgactttcttattgaacct
attgataagcatgaagctgtgcagtttgacatgaattggaaagtgcctgctatcctttat
tacgtcaaaaggaatcttaattccaaatacaacctgaacatcaagaaccctattgaggca
agtgtcctgctggctgaagcctcgctagcacggaagcagcggaaaacacatactaccttt
attccactgatgctgaatgagatgccgcaggttggggacctggtgggcctggatgctgag
tttgtcactcttaatgaggaggaagcagagttacgcagtgatggcaccaagtctaccatc
aaaccaagccagatgtcagtagcaaggattacttgtgttcgaggccagggacccaatgag
ggtatccccttcattgatgactacatctctacccaggagcaggtggtggattacttgact
cagtactcggggattaagccaggagacctagatgccaagatttcctctaagcacctcaca
actctcaagtctacctacttaaagcttcgttttcttatagacattggagtcaagtttgtg
ggtcatggtctgcagaaggacttccgggtcatcaacctcatggtgcccaaggaccaagtc
cttgacactgtctatctctttcatatgccccgaaaacgaatgatttccctgcggttcctt
gcttggtacttcctagacctgaagattcaaggggaaacccatgacagtattgaggatgcc
cgtacagcccttcagctctaccgaaagtatctggagctaagcaaaaatggcacggagcct
gaatccttccacaaagtgctcaagggtctttatgagaagggccgaaagatggactggaag
gttcctgagcctgagggtcagacgagtcccaagaatgcagctgtcttctcctcagtgttg
gcgctctga
DBGET
integrated database retrieval system
