Poriferisphaera corsica: KS4_21790
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Entry
KS4_21790 CDS
T06996
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KS4_21790 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcor02000
]
KS4_21790 (msbA)
Enzymes [BR:
pcor01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
KS4_21790 (msbA)
Transporters [BR:
pcor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KS4_21790 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_23
AAA_22
MMR_HSR1
AAA_15
AAA_16
RsgA_GTPase
Secretin
YobI-ATPase
AAA_28
AAA_24
AAA_18
IstB_IS21
Mg_chelatase
AAA_30
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QDU34117
UniProt:
A0A517YV67
LinkDB
All DBs
Position
2513197..2515065
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AA seq
622 aa
AA seq
DB search
MNLFWTYAARMLQFRKQIVIAVVAAIFDAISAFAGFSVVMLIINQLFGKDDTTIHKLLSQ
KLQDISNQDWMGFIHIGDLTPLADYIPTDPFTGLAYVFGFIMILSIFGASMRYVFQATVL
TISFRTVMILRKEAFQRLLHAPYEILLEQGSIDFMSRITRDTNQLARGFNTIMGRAAREA
LLSIVFLTLAFVVNWKLTLLFLLAAPPMAFVIRKLSKRIRRASKKAMSAYGGMLGAVSES
TQAIQVVKVHNAEGYERRRFNVINKQVFRQEMKARAARVLASPLTELIAIAGMMGVVLVA
AYQVYYQNTNPTDMLKVLMSLGLAGATAKPLAKLNNDLQEAAAAAERVDELLKLPIEKNT
REIYKHLNDHLPPHLESIEFKDVSYTYPRADQPAIRHLDLQVKFGQNIAIVGPNGSGKST
LLNLLPRLGDAQKGQVLIDGHDITTISIRSLRKQIAVVTQQTFLFEGTIADNIAYGRRHT
SREDIIAAATAARADEFISVLDNGYDTFLGEGGSGLSGGQKQRICIARAILRNPRILILD
EATSQIDADSEYKINQAMAEFRKGRTTFVIAHRLSTVIDADQIIVMVDGEISDIGSHNEL
LERSTTYQTLTHTQLQPYEDLD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacttattctggacatatgcagcgcggatgcttcaattccgcaaacagatcgttatt
gcggtcgtcgcggcaatcttcgatgccatctcagccttcgctggcttcagtgttgtgatg
ttgatcatcaatcaattgtttggcaaagatgacacgacaatacacaaattgctatcgcag
aaacttcaagacataagcaatcaagattggatgggtttcattcatattggtgatttaaca
ccactcgctgattacatccccaccgatccctttaccggcttagcttacgtctttggcttc
attatgatcttgagtatttttggcgcatcgatgcgatacgtctttcaagcaaccgtcctc
accattagtttccgcacggtcatgatcttacgcaaagaagcgtttcaacgtttactacac
gcgccttatgaaattctgcttgaacaaggctcgattgatttcatgagccgaattacacgt
gataccaatcagctcgcccgtggttttaacacgatcatggggcgtgcagctcgcgaggca
ttgctctcaatcgtctttctgacattagcattcgtggtcaattggaaactcacgctactg
ttcttgcttgccgctccacccatggcatttgtgatccgcaaattaagcaagagaattaga
agagcaagcaaaaaggcaatgagcgcctacggcgggatgctcggtgctgtatccgaatcc
acccaggcaattcaggtcgttaaagtacacaacgcagaaggctacgaacgccgacgcttt
aatgtgatcaacaagcaggtttttcgtcaagaaatgaaagcgagagccgcacgtgttctt
gcatcaccgctcaccgaattaatcgcgatcgcaggcatgatgggcgtcgtcctcgtcgcg
gcttaccaagtctactaccaaaatacgaaccctacggacatgctcaaagtcctcatgtca
ctcggtcttgctggcgcaacggcgaagccactggctaaactcaataacgacctgcaagaa
gccgcagcagctgcagaacgcgtcgacgagttgcttaaactgccgattgaaaaaaacaca
cgagaaatctacaagcatctcaacgatcacctgcctccacatctggaatcaattgaattc
aaagatgtgtcttatacctaccccagagcagatcagccagccatcaggcatctcgatttg
caagtaaaatttgggcaaaacatcgcaatcgttgggccaaatggatcgggcaaatcaaca
cttcttaacctgctccctcgtttaggtgacgcacaaaaaggccaagtgctgatcgatggt
cacgatatcactacaatttcaattcgcagtttgcgtaagcagatagccgtcgtcacacaa
cagaccttcctcttcgaaggcaccatcgctgacaacatcgcgtatggccgccgacacacc
tcccgagaagacattatcgccgcagcgacagccgctcgtgcggatgaatttatcagcgtc
ctcgacaatgggtatgacacatttctcggcgaaggtggatctggcctttcaggtggccaa
aagcagcgtatctgcatcgctcgggcaatcctgcgtaacccacgtatcttgattcttgat
gaagcaaccagccaaattgacgctgactctgagtataaaatcaatcaagcaatggctgaa
ttccgcaaaggccgcacaacgtttgtaatcgcccaccgtttaagtactgtgatcgatgcc
gatcaaattatcgtcatggttgatggcgagatctcagacatcggctcacataacgaacta
ctcgagcgcagcacaacatatcaaacactaacacacacacaattgcagccatacgaagat
ctagattaa
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