Prevotella communis: L6468_12445
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Entry
L6468_12445 CDS
T09070
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcou
Prevotella communis
Pathway
pcou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L6468_12445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcou03021
]
L6468_12445
03400 DNA repair and recombination proteins [BR:
pcou03400
]
L6468_12445
Enzymes [BR:
pcou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L6468_12445
Transcription machinery [BR:
pcou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L6468_12445
DNA repair and recombination proteins [BR:
pcou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L6468_12445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UKK61777
LinkDB
All DBs
Position
complement(3003677..3004669)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVVMLEANERFGKFEFRPLEPGFGVTIGNALRRILLSSLEGYAINTIRIA
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQIVEEFENEKVSITVENSTEFKAGDIGKYLT
GFEVLNPDLVICHLDSKASMQIDLTINKGRGYVPSDENREFCTDVNVIPIDSIYTPIRNV
KFAVEPFRVEQKTDYDKLVLEVTTDGSIHPKDALKEAAKILIYHFMLFSDEKITLETNDV
EGNQEFDEEVLHMRQLLKTKLVDMNLSVRALNCLKAADVETLGDLVQYNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacccgataaagtggtaatgttggaagccaacgagcga
ttcggcaagttcgaattccgtccgttggagccgggcttcggtgtaaccatcggtaacgcc
ctgcgccgcatactcctttcatcgcttgagggctatgccatcaacaccatccgtattgct
ggtgtagagcatgagttctcatccgttcctggtgtaaaggaagatgttaccaacattatc
ttgaatctgaagcaagttcgattcaagcaaatagttgaagaattcgagaacgagaaagtc
agcatcaccgtcgagaattcaaccgagttcaaggccggtgatatcggcaagtatctgact
ggatttgaagtgttaaatcccgatttggtgatttgtcatctcgactctaaggcttcaatg
cagatagatctgaccattaacaaaggtcgtggatacgttccttcagatgagaaccgtgag
ttctgcactgacgtgaatgtcattcccatcgattctatctacactcctatccgtaacgtg
aaattcgcagtagagcctttccgcgttgagcagaagaccgactacgataagctcgtgctg
gaagtcacaacggatggttccattcacccaaaggacgccctgaaagaggctgctaagatc
cttatctatcacttcatgctcttctctgatgagaagattaccctcgagaccaacgatgtc
gagggcaaccaggagtttgatgaggaggtactgcacatgcgtcagttgctcaagaccaag
ctcgttgacatgaacctctctgttcgtgccctgaactgtctgaaggctgccgatgtagag
acacttggtgatctcgtacagtacaataagactgacctcctgaagttccgtaactttggt
aagaaatcgctcactgagcttgatgatttgctcgagagtctgaatctgtcgtttggaacc
gatatttcaaagtataaactggacaaagagtaa
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