Pyrus communis (pear): 137723410
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Entry
137723410 CDS
T10779
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137723410
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137723410
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Tir_receptor_C
Motif
Other DBs
NCBI-GeneID:
137723410
NCBI-ProteinID:
XP_068318704
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Position
17:12228883..12231908
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AA seq
381 aa
AA seq
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MGNCHGHHRKRRNGPVSGETASSGFKHSPSGQAAQIPCSSSSSAKKTSSMVVALPYAHVD
SSLRALAAQAEGFGRLAVGGLNGAVYHVTTLADDGPGSLREGCRKKEPLWIVFEISGTIH
LKSHLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGSDVDGIQIKPNSK
HIWIDQCSLRDYEDGLIDISRGSTDITISRCHFSQHDKTILIGADPSHIDDRCIRVTIHH
CFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSECNIYEAGKKKVAFKYL
TEKAADKETAVTGDIRSEGDLFVTGTHAGLSPDGGEHCMFHPTQHYQTWTKGPPADDLKH
VLQHCTGWQGVTRPADQGVAM
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactgccacggccaccaccgtaaacgccgtaacggccccgtctccggtgaaacg
gccagttctggctttaaacatagtccgtcgggtcaagcagctcaaatcccttgctctagc
tcatcgtcagctaaaaagaccagcagcatggtggtcgccttgccgtacgctcacgtcgac
tcgagcttgcgcgccctcgccgcccaggccgagggcttcggccggctcgccgtcggcggt
ctcaacggggccgtttaccacgtcactactctagcagatgatggtccgggttcacttagg
gaaggatgccgaaagaaagagccgctttggattgtctttgaaatttcaggcactatccat
ctcaagtctcacttgaacgtatcatcgtacaagactatagatgggcgaggtcagaggatt
aaacttacggggaaggggttgaggttgaaggaatgtgaacatgtgattgtatgcaattta
gagtttgaaggtggtagaggatcagatgttgatggcatccaaataaaacccaattctaaa
cacatatggatagatcagtgcagccttcgtgactatgaagacggactaattgatatctcc
agaggaagcacggatattacaatttcgaggtgtcatttttcacagcatgataagacaata
ctgattggagcagatccctcgcatattgatgacagatgcatccgggttaccattcaccac
tgtttctttgatgggaccagacagagacatcctcgtgttagatttgcgaaagtacattta
tataacaattatacccgaaactggggcatatatgctgtttgtgcgagtgtagaatcgcag
atattctctgaatgcaatatatatgaagcaggaaagaaaaaagtggcatttaagtacctt
acggagaaggcagcggacaaggagacggctgtgactggcgacattaggtccgaaggggac
ttattcgtgaccggaactcatgcaggattatcacccgatggcggtgaacattgcatgttt
catcctacccaacactatcagacatggacaaaaggacctccagcagatgatcttaagcat
gttcttcaacattgcacaggatggcagggtgttacgcggccagctgatcaaggagtagct
atgtag
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