Pyrus communis (pear): 137735338
Help
Entry
137735338 CDS
T10779
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137735338
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137735338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137735338
NCBI-ProteinID:
XP_068330858
LinkDB
All DBs
Position
5:20632335..20637459
Genome browser
AA seq
499 aa
AA seq
DB search
MLLPTTCILLICFSLSLLSKASSSSLNLTLPHQHPDPDAVAHEVQRRVNASVSRRQMLSI
DVKDQSQCLSGNPIDDCWRCEDWSNNRQKLADCGIGFGMEALGGKGGLIYIVTDSSDSNP
ANPTPGTLRHAVIQTEPLWIIFSADMTIKLKYELIVNSFKTIDGRGVNVHVTGGGCITLQ
YVSNIIIHNIHVHHCKPAGNTNIASSPTHVGWRGKSDGDGISLFGARKIWIDHCSLSFCA
DGLIDAIMGSTGITISNNYFAHHDEVMLLGHDDKYLPDSGMQVTIAFNHFGVALVQRMPR
CRRGYIHVVNNDFTRWEMYAIGGSANPTINSQGNRYTAPQDENAKEVTKRVDTNEGDWSD
WNWRTAGDIMVNGAFFVPSGAGMSTQYAKASSIEPKSVALIERITANAGVFGDPRESSRV
TSPDDGTITDGGSTTSGSGGSNGKGNDDDYFGMIFGNGAGPSSSSSSSTIFLCLLIIFIL
YVTTNHGGTLLSLPLLTLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcctaccacctgcattctcttaatttgtttctctctatcccttctctctaaa
gcttcttcgtcctccttgaacctcaccctccctcaccagcacccagaccctgatgctgtt
gctcatgaagttcaaaggagagtcaatgcgtctgtttccaggcgccaaatgctgtccatt
gatgtcaaggaccaaagccagtgcctcagcggtaacccaatcgacgactgctggcgctgc
gaggactggagcaacaaccgccaaaagctcgccgattgcggcattgggttcggcatggaa
gccttggggggcaaagggggcctgatctacatagtcaccgactcctccgattccaacccg
gcgaacccaactccgggcacgctccgccacgccgtcatccaaaccgagcccctctggatc
atcttctccgccgacatgaccatcaagctcaaatacgagctcattgtcaacagcttcaaa
accatcgacggccgcggcgtcaacgtccacgtcaccggcggtggatgcataaccctccag
tacgtctccaacatcatcatccacaacatccacgtgcaccactgcaagcccgccggcaac
accaacatcgcctccagccccacccacgttggctggcgcggcaaatcggacggcgacggc
atctccctcttcggcgctcgcaaaatctggatcgaccactgctccctctcgttctgcgcc
gacggactgatcgacgccatcatggggtccaccggaatcacgatttccaacaactacttt
gcccaccacgacgaggtgatgctattgggccacgacgacaagtacctgccggacagcggg
atgcaggtgacgattgcgtttaaccacttcggtgtggcgctggtgcagcgtatgccgcgg
tgcagacgggggtacatccacgtggtgaacaacgacttcacgcggtgggagatgtatgcc
atcggcggtagcgctaaccccaccatcaacagccaggggaaccgctacactgctcctcag
gacgagaacgccaaggaggtgacaaagcgcgtggacacgaacgagggcgactggtctgac
tggaattggaggacggcgggggacatcatggtaaatggcgcgtttttcgtgccgtccggc
gcgggaatgagcactcagtacgccaaggcctcaagcatcgagcccaagtctgttgctctc
atcgaacgaatcacagccaacgccggtgttttcggtgacccaagggaaagcagtcgcgta
acaagccctgatgacgggaccatcaccgacggcggcagcaccaccagtggcagtggagga
tcgaacggcaagggcaatgacgatgactatttcggaatgatatttgggaacggtgctgga
ccaagctcttcatcatcttcaagcacaatattcttgtgtctcttaattatttttattttg
tacgttaccactaatcatggtggcactctattatctttacccttattaacattattataa
DBGET
integrated database retrieval system