Pyrus communis (pear): 137738985
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Entry
137738985 CDS
T10779
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137738985
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137738985
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137738985
NCBI-ProteinID:
XP_068334557
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Position
7:2384910..2387354
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AA seq
459 aa
AA seq
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MVLGPMASKLNLVLFMISFCMLVPSLKAETANDTLNIANFDAVWQERAMKAQKAALKAYQ
PNPEQVTEDFNESVEQTVVEEDLEDDQSAGNSTRRHLRGKHNKGPCKATNPIDRCWRCRA
NWANNRKKLASCVKGFGRKTRGGKKGAYYIVTDSSDDNVHDPKPGTLRHAVIQTQPLWII
FARSMVIRLSQELIVTSHKTIDARGANVHIAHGAGITLQFVQNVIIHGLRIHDTVPGSGG
MIRDSLSHIGIRTQSDGDGISIYGSSNIWLDHLSMWNCADGLIDAIQGSTAITISNCHFT
RHNDVMLFGASDAFAGDAIMQITVAFNHFGKGLIQRMPRCRWGFVHVVNNDYTHWIMYAI
GGSSHPTIISQGNRFIAPPNQAAKEVTKRDYAPESVWKSWQWRSEGDLMMNGAFFVQSGV
PNKKHGFGKLDMIKAKPGTFVTRLTRFAGSLNCKVGKKC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggttcttggaccaatggcatcgaagctcaatttggtcctctttatgatttctttctgc
atgctggttccaagcttgaaggctgagacagcaaatgacaccctcaacattgctaacttc
gatgccgtatggcaggaacgagccatgaaggctcagaaggcagccctcaaggcctaccaa
cccaacccggaacaagtcaccgaggacttcaacgaaagcgttgaacagaccgtcgttgag
gaggaccttgaagatgatcagtctgcgggtaacagcacaaggaggcatctgagaggaaaa
cataacaagggcccttgcaaggccacaaacccgatcgaccgctgctggcggtgccgggcc
aactgggctaacaaccgcaagaagctggccagctgcgtgaaaggctttggccgcaagacg
cgcggaggcaagaaaggggcttactacattgtcaccgactcttcggacgacaatgtccat
gaccctaagcccggaaccctacgtcacgccgtgatccaaacgcaaccgttgtggatcata
tttgcacgtagcatggtcatcaggctgagccaagagctcatagtaacgagccacaagaca
attgacgcacgaggggcaaatgtgcacattgctcatggcgcagggatcacactccagttc
gttcagaacgtaattattcatggcctccgcatccacgataccgtaccaggcagcggtggt
atgatcagggactccctgagtcacatcgggattcgcacacagagtgacggagatggtatc
tccatttatgggtcgtctaacatttggctcgaccatctttctatgtggaattgcgcggat
gggctcatcgacgccattcaagggtctactgctattaccatatccaactgccacttcacc
cgtcacaacgacgtgatgcttttcggggctagcgatgcgtttgcaggggatgcaatcatg
caaataacggttgcatttaaccatttcggcaagggattgatacagagaatgccaagatgc
agatggggatttgtccatgtcgtgaacaatgactacacacattggatcatgtatgccatc
ggaggaagctctcaccccacaattatcagccagggcaaccgattcatcgccccaccaaac
caggctgcaaaagaagtgacgaagagagactatgcaccggagagcgtgtggaagagctgg
caatggagatcagaaggagatcttatgatgaacggagcattctttgttcagtctggagtg
ccgaacaagaagcatggatttggcaagttagacatgatcaaagcaaaaccaggcacattc
gtcacaaggctcacacgctttgcaggttctctcaactgcaaggttggcaagaagtgctaa
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