KEGG   Psychrobacter cryohalolentis: Pcryo_1960
Entry
Pcryo_1960        CDS       T00350                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pcr  Psychrobacter cryohalolentis
Pathway
pcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Pcryo_1960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcr03400]
    Pcryo_1960
DNA repair and recombination proteins [BR:pcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Pcryo_1960
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Pcryo_1960
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_22 RsgA_GTPase AAA_23 DnaJ_CXXCXGXG AAA_33 nSTAND3 BCA_ABC_TP_C NACHT AAA_21 Viral_helicase1 cobW AAA_25 NTPase_1 MeaB Rad50_zn_hook
Other DBs
NCBI-ProteinID: ABE75737
UniProt: Q1Q9B6
LinkDB
Position
2419404..2422310
AA seq 968 aa
MAHEYIKVRGARTHNLKNIDLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPDVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARIGTP
FCPEHGEPMVAQSVTEMVDQVMALPDDTKIMILAPVIRERKGEHTVLLEQLIGQGFVRVR
VDGDVYDTDELPTLDKKKKHTIEVVVDRFKVRDDLGNRVAESLETALRLGQGLVTLHFMD
GNPKEGGDANQVMSAKHSCPVCDRAVSELEPRMFSFNNPYGACPSCDGLGKRQYFSAEKL
ITHHEKSLNQGAINGWDKRHAYYFGLLSTVCNHFKIDMDAPWQDLPKEQQDLIMQGSGKE
KLTFNFTDERGRKTNKTVPFEGVLPYLERRYAKTQSNLVRDELAKYLADTTCNVCDGARL
NEISRNVRVDDQTIAQIVKLSIGDAAEYYKTIKIGGHKGEVAEKIFKEINERLNFLVSVG
LDYLSLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLKTLTRL
RDLGNTVLVVEHDEDAIRQADHVIDIGVGAGIHGGHIIAQGTVDDIMANKESLTGQYMSG
KKRIEIPSIRHKAKTIDMEVKGKAKPKQVPMTIELKGASGNNLHDVDLTLPIGIMTCITG
VSGSGKSTLINRTLMPLAATQLNNASTLIADKHDSISGLEHLDKMVDIDQSPIGRTPRSN
PATYTGVFTPVREMFAQTQEARARGYKAGRFSFNVKGGRCEMCQGDGLIKVEMHFLPDMY
VPCDTCEGKRYNRETLEIHYKGKTIADVLDMTVEDATEFFSAIPAIYRRLQALMDVGLSY
IRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYILDEPTTGLHFHDIDKLLHILHALRD
KGNTIVVIEHNLDVIKTADWVIDLGPEGGKGGGMIIAEGTPEEVAEVEESYTGIFLKPML
EQAMKEVS
NT seq 2907 nt   +upstreamnt  +downstreamnt
atggcacacgagtatattaaggttcgcggcgcacgcactcataatctaaaaaatatcgac
ttagacattccacgagataaatttgtggtcattacgggtttatcaggctctggtaaatct
tcattggcattcgataccttgtatgctgaagggcaacgtcgttatgtcgagagcttgtca
gcatatgcgcgtcagttcttatctcaaatggagaagccagacgtcgatagtatcgaaggc
ttgtcgccggcgattgctattgagcaaaaatcgactaaccataatccgcgctcaaccgtc
ggtacgattaccgaaatttacgactatctgcgtctgctttatgcgcgtattggtacgccg
ttttgccctgagcatggcgagccaatggtcgcgcagtcggtcactgaaatggtcgatcaa
gtcatggcgctgcccgatgataccaagatcatgatacttgcgccggttattcgtgagcgt
aaaggtgagcataccgtgttgcttgagcaattaattgggcaagggtttgtacgtgtacgc
gtcgatggtgatgtctacgatactgatgagctaccaacactcgataaaaagaaaaaacat
accattgaagtcgtcgttgaccgctttaaagttcgtgatgacttgggtaaccgcgtcgct
gaaagtttggagacggctctacgtttaggccaaggtttggtgacgctacactttatggat
ggcaatccaaaagaaggcggtgatgctaaccaagttatgtctgctaagcactcttgccct
gtttgtgatcgtgccgtgtctgagcttgaaccgcgcatgtttagttttaacaatccttat
ggtgcttgcccaagctgtgatggtctcggtaaacgtcagtatttctctgccgaaaaactg
attactcatcacgaaaaatcgctcaatcaaggggcgattaatggttgggataagcgtcat
gcgtattactttggtctgctatctaccgtttgtaatcacttcaaaatcgatatggacgca
ccgtggcaagatttaccaaaagaacagcaagaccttattatgcaaggctctggtaaagag
aagctgacgtttaactttactgatgagcgcggtcgtaaaaccaacaagaccgtaccattc
gaaggtgtgcttccatacttagagcgccgttatgccaaaacccaaagcaatctcgtccgt
gacgagctagcgaaatacttggctgatactacttgtaatgtctgtgatggcgcgcgtctc
aatgagatctcacgcaatgtccgcgtcgatgatcaaaccatcgctcaaatcgtgaagctg
tctatcggtgatgcggctgaatattataagaccattaaaattggcggtcataaaggcgaa
gttgcggaaaaaatctttaaagagatcaatgaacgtctaaacttcctcgtcagtgtcgga
cttgattatttatccctcgcccgctctgctgaaacgctatcgggcggtgaagcacagcgt
attcgtttggctagccaaatcggcgcaggtctgatgggtgtgatgtatgtactcgatgaa
ccatcgattggtttacatcaacgtgataatgatcgcttgctaaaaaccttaacgcgctta
cgtgatttgggcaacacggtactggtcgttgagcacgatgaagatgcgattcgtcaagcg
gatcatgttatcgatatcggagtgggcgctggcatacatggtggtcatatcatcgctcaa
ggtacggtcgatgacattatggcaaacaaagaatcgctgactggacaatatatgtctggt
aagaaaagaattgagattccaagcattcgccataaagccaaaacgatcgatatggaagtt
aaaggtaaagccaagcccaaacaagttcctatgaccattgagctaaaaggtgcatctggc
aataacttacacgatgttgatttgaccttgccaataggtattatgacttgtatcacgggt
gtttcgggttctggtaaatcgaccttgattaaccgtactttaatgccacttgccgcgact
cagttaaacaatgcttccacgctcatcgcggataagcatgacagcattagcggtcttgag
catttggataaaatggtcgatatcgatcaaagcccgattggtcgtacaccgcgctcaaat
ccagcgacgtatacgggcgtgtttaccccagtacgtgagatgtttgcacaaactcaagaa
gcacgcgcccgtggttataaagcgggtcgctttagcttcaatgtcaaaggcggacgctgt
gagatgtgtcaaggtgatggtctcattaaagttgagatgcattttttaccggatatgtat
gtgccgtgtgatacttgtgaaggcaagcgttataaccgcgagaccttagagattcactat
aaaggtaaaaccatcgccgacgtgcttgatatgacagtcgaagatgctactgagttcttc
tcagcgataccagccatctatcgtcgcctgcaagcactcatggatgttggtctgagctat
attcgtttgggtcagtctgcaccgacgctatcaggtggtgaagcacagcgtgtcaaactg
gcgcgtgagcttgccaaacgcgataccggacagacgctttatatcttggatgagccaact
actggtttgcatttccatgatatcgataagctgctgcatatcttgcatgccttacgtgat
aaaggtaatactatcgtggtcatcgagcacaacttggacgtcatcaaaacggcggattgg
gtaattgatttaggtcctgaaggcggtaaaggtggcggcatgatcatcgctgaaggtacg
cctgaggaagtggctgaagttgaagaatcgtacacgggtatattcttgaagccgatgctt
gagcaagcgatgaaagaagtaagctga

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