Psychrobacter cryohalolentis: Pcryo_1960
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Entry
Pcryo_1960 CDS
T00350
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pcryo_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_1960
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcryo_1960
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pcryo_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_22
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_33
nSTAND3
BCA_ABC_TP_C
NACHT
AAA_21
Viral_helicase1
cobW
AAA_25
NTPase_1
MeaB
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ABE75737
UniProt:
Q1Q9B6
LinkDB
All DBs
Position
2419404..2422310
Genome browser
AA seq
968 aa
AA seq
DB search
MAHEYIKVRGARTHNLKNIDLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPDVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARIGTP
FCPEHGEPMVAQSVTEMVDQVMALPDDTKIMILAPVIRERKGEHTVLLEQLIGQGFVRVR
VDGDVYDTDELPTLDKKKKHTIEVVVDRFKVRDDLGNRVAESLETALRLGQGLVTLHFMD
GNPKEGGDANQVMSAKHSCPVCDRAVSELEPRMFSFNNPYGACPSCDGLGKRQYFSAEKL
ITHHEKSLNQGAINGWDKRHAYYFGLLSTVCNHFKIDMDAPWQDLPKEQQDLIMQGSGKE
KLTFNFTDERGRKTNKTVPFEGVLPYLERRYAKTQSNLVRDELAKYLADTTCNVCDGARL
NEISRNVRVDDQTIAQIVKLSIGDAAEYYKTIKIGGHKGEVAEKIFKEINERLNFLVSVG
LDYLSLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLKTLTRL
RDLGNTVLVVEHDEDAIRQADHVIDIGVGAGIHGGHIIAQGTVDDIMANKESLTGQYMSG
KKRIEIPSIRHKAKTIDMEVKGKAKPKQVPMTIELKGASGNNLHDVDLTLPIGIMTCITG
VSGSGKSTLINRTLMPLAATQLNNASTLIADKHDSISGLEHLDKMVDIDQSPIGRTPRSN
PATYTGVFTPVREMFAQTQEARARGYKAGRFSFNVKGGRCEMCQGDGLIKVEMHFLPDMY
VPCDTCEGKRYNRETLEIHYKGKTIADVLDMTVEDATEFFSAIPAIYRRLQALMDVGLSY
IRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYILDEPTTGLHFHDIDKLLHILHALRD
KGNTIVVIEHNLDVIKTADWVIDLGPEGGKGGGMIIAEGTPEEVAEVEESYTGIFLKPML
EQAMKEVS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgagtatattaaggttcgcggcgcacgcactcataatctaaaaaatatcgac
ttagacattccacgagataaatttgtggtcattacgggtttatcaggctctggtaaatct
tcattggcattcgataccttgtatgctgaagggcaacgtcgttatgtcgagagcttgtca
gcatatgcgcgtcagttcttatctcaaatggagaagccagacgtcgatagtatcgaaggc
ttgtcgccggcgattgctattgagcaaaaatcgactaaccataatccgcgctcaaccgtc
ggtacgattaccgaaatttacgactatctgcgtctgctttatgcgcgtattggtacgccg
ttttgccctgagcatggcgagccaatggtcgcgcagtcggtcactgaaatggtcgatcaa
gtcatggcgctgcccgatgataccaagatcatgatacttgcgccggttattcgtgagcgt
aaaggtgagcataccgtgttgcttgagcaattaattgggcaagggtttgtacgtgtacgc
gtcgatggtgatgtctacgatactgatgagctaccaacactcgataaaaagaaaaaacat
accattgaagtcgtcgttgaccgctttaaagttcgtgatgacttgggtaaccgcgtcgct
gaaagtttggagacggctctacgtttaggccaaggtttggtgacgctacactttatggat
ggcaatccaaaagaaggcggtgatgctaaccaagttatgtctgctaagcactcttgccct
gtttgtgatcgtgccgtgtctgagcttgaaccgcgcatgtttagttttaacaatccttat
ggtgcttgcccaagctgtgatggtctcggtaaacgtcagtatttctctgccgaaaaactg
attactcatcacgaaaaatcgctcaatcaaggggcgattaatggttgggataagcgtcat
gcgtattactttggtctgctatctaccgtttgtaatcacttcaaaatcgatatggacgca
ccgtggcaagatttaccaaaagaacagcaagaccttattatgcaaggctctggtaaagag
aagctgacgtttaactttactgatgagcgcggtcgtaaaaccaacaagaccgtaccattc
gaaggtgtgcttccatacttagagcgccgttatgccaaaacccaaagcaatctcgtccgt
gacgagctagcgaaatacttggctgatactacttgtaatgtctgtgatggcgcgcgtctc
aatgagatctcacgcaatgtccgcgtcgatgatcaaaccatcgctcaaatcgtgaagctg
tctatcggtgatgcggctgaatattataagaccattaaaattggcggtcataaaggcgaa
gttgcggaaaaaatctttaaagagatcaatgaacgtctaaacttcctcgtcagtgtcgga
cttgattatttatccctcgcccgctctgctgaaacgctatcgggcggtgaagcacagcgt
attcgtttggctagccaaatcggcgcaggtctgatgggtgtgatgtatgtactcgatgaa
ccatcgattggtttacatcaacgtgataatgatcgcttgctaaaaaccttaacgcgctta
cgtgatttgggcaacacggtactggtcgttgagcacgatgaagatgcgattcgtcaagcg
gatcatgttatcgatatcggagtgggcgctggcatacatggtggtcatatcatcgctcaa
ggtacggtcgatgacattatggcaaacaaagaatcgctgactggacaatatatgtctggt
aagaaaagaattgagattccaagcattcgccataaagccaaaacgatcgatatggaagtt
aaaggtaaagccaagcccaaacaagttcctatgaccattgagctaaaaggtgcatctggc
aataacttacacgatgttgatttgaccttgccaataggtattatgacttgtatcacgggt
gtttcgggttctggtaaatcgaccttgattaaccgtactttaatgccacttgccgcgact
cagttaaacaatgcttccacgctcatcgcggataagcatgacagcattagcggtcttgag
catttggataaaatggtcgatatcgatcaaagcccgattggtcgtacaccgcgctcaaat
ccagcgacgtatacgggcgtgtttaccccagtacgtgagatgtttgcacaaactcaagaa
gcacgcgcccgtggttataaagcgggtcgctttagcttcaatgtcaaaggcggacgctgt
gagatgtgtcaaggtgatggtctcattaaagttgagatgcattttttaccggatatgtat
gtgccgtgtgatacttgtgaaggcaagcgttataaccgcgagaccttagagattcactat
aaaggtaaaaccatcgccgacgtgcttgatatgacagtcgaagatgctactgagttcttc
tcagcgataccagccatctatcgtcgcctgcaagcactcatggatgttggtctgagctat
attcgtttgggtcagtctgcaccgacgctatcaggtggtgaagcacagcgtgtcaaactg
gcgcgtgagcttgccaaacgcgataccggacagacgctttatatcttggatgagccaact
actggtttgcatttccatgatatcgataagctgctgcatatcttgcatgccttacgtgat
aaaggtaatactatcgtggtcatcgagcacaacttggacgtcatcaaaacggcggattgg
gtaattgatttaggtcctgaaggcggtaaaggtggcggcatgatcatcgctgaaggtacg
cctgaggaagtggctgaagttgaagaatcgtacacgggtatattcttgaagccgatgctt
gagcaagcgatgaaagaagtaagctga
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