Penicillium rubens: N7525_003134 Help Entry N7525_003134      CDS       T01091                                  Name (RefSeq) uncharacterized protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism pcs  Penicillium rubens Pathway pcs03018   RNA degradation Brite KEGG Orthology (KO) [BR:pcs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     N7525_003134  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcs03019]     N7525_003134 Messenger RNA biogenesis [BR:pcs03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      N7525_003134   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      N7525_003134 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT ARM_Cnot1 Ebp1_C Zemlya Motif Other DBs NCBI-GeneID:  8315764 NCBI-ProteinID:  XP_002559469 UniProt:  B6H3Z8 LinkDB All DBs Position Unknown AA seq 2306 aa AA seqDB search MTFPPPHPSAQSSIASGTDKSSSTRTDIGAWGRSVSQSGARRGLTPLATNISSAAPPTAS RGLDAGLGVSTPSSFSAVLSSARGLSGGSPKHTSSPFTSLQSGSQQHATTLSSPKFRAHT PSIGSHLASATGSTPGGGGTGGGGGGPGSSRGVFSPLSSGTTVNSPTGFASDKPGSTAAH SSQSSLTKISIAQVFLLLDSITEKEGKEKWETKAAQIHKLVTSNGMEVFSKYFRRLLTGN APQIFPGVNKSVENAGNYPLLVQELQKVSSDMEQSQKIAETVDTSEGDIFRDFDLSTFLD HFRLDPVVKVALALAFKLTSKSDLRAKADAILSNSIAPFLQSLASPTEVTKDYSNAFLGM TIERFILYPPRNFTDDVKAKLVYAANLRYQKLGLDMPFEVSSALQMFNFVNPQYVLVRQL HAKGARATANIETISEVLNSDPKNWSEEHLASALLFMILSQYWEQFSLETFLSAYNDKPI NWPLVFRHFDREGLRVDPKQFTKLYSVLSAMSVNDSSLDVQKLWGGDWEHRDTQMSFLTA FVASRIDPLQITNLRATFPADFFEDAPDIVKLQGERAAKSPLRSMDAMKAIFDLALFSQA SWAATESQLLIKAVVQYDLPVFLVSALAIPQPWSSVQQSFVLRTFIVFISKQEDGYQLAL HGAWRQDRQWVAEQLFTTFTQDPTSTAVIYEHAAAYGWLDYLLGFTNGLALDLACYSHRK SPFDLEQWVRNAAQKGAIDMGGLLSKFLRIKAEDELHVQRKEQSAHQMVSLAVKTVYTLL SVLEEYVGDRENLTPVQRICIQTYPRLINYGEGFDDIIDANGENGNTLPDSIDKQMQELF GKMYHEELSLREMLELMRKYKSSRDPTEQDLFACMVHGLVDEYHCYHEYPLEALTKTAVM FGGIINFRLVDGITLKVGLGMILEAVREHEPHDPMYKFGVEAIEQLINRLPEWAGFCHLL FQIPSLQGTPIYQKAEEVLREQGNQIGEAETGPFDGLASVPLTNGNSVGSPIGDGSVRKF RSIQLDPPLRSELYEDPDEDIQDKILFVLNNVSEQNIDEKLEDLREVLRDQHHQWFAAYL VEERAKLQPNFQQLYLDLLGRIGDKILWAEVLRETYVSVAKLINSEGTLSSSTDRGHLKN LGAWLGSLTIAKDKPIKHKNIYFKGLLLEGYDTQRLMVTIPFTCKVLVQATKSTVFKPPN PWLMDILGLLLELYHFAELKLNLKFEIEVLCKDLDLDHKTIEPAIVIRDRAAHVEEPLPT VNAPEGLTEPFEDLSLSAINPAVRSERLSPAAIMSTLPSLDKILVLPSSASSMVDPSILK QIVHTAVERAIAEIITPVVERSVTIASISTVQLVSKDFAMEPDEERVRHAAGIMVRQLAG SLALVTCKEPLKVSMTNYIRMIQQDYSEQPMPEGLILMCVNDNLDAACGIVEKAAEEKSL PEIEKVIEPQLEARRRHQASRSNDPFIDPSMNRWGLFIPEPYRQAPGGLNKEQLAIYEEF ARQSRGPAPSTDASAGRQLPDVLGESYPAIPNLSTPAEQPAIPHRTPQAQPAISQMPPVQ TNGFLDAQSPRERVESLVSDLQQSARGAPEEHVKDLGRDSAVLQEYNQALRAIIHSTNGE ELARLTSLKVCTLLYSQPHGSLEIEVLVHLLAKLCDMSSLIARYTWALLSEVDDEHMFNV PVTVALIDAGLLDIRRVDTNLTRLILSRNVPALELLGNLMDRVLFNEEPSALRSDFSGSL DAMSQWLAEDASVAPGLEIVRKLRESGIPEVVNPLLGDQARSKRDQMEYIFSEWIGIYKA PGATDRTFHSFLQDLHNRQVMNNQEDSALFFRLSIDISVAMFEHESQNPNGSLDEAFLYI DALAKLVILLVRFQGESAGAVKANKATYFNSILSLLVLVLNHHQVMRGEAFNQRVFFRLF SSILCEYSMNGLQHTEQHQGMIFALANKFLSFQPRYVPGFVYGWLCLVSHRVFMSDMLNM PDRAGWAPYCEIMQALLSYMGEQLKAVNITYVAKDLYKGVLRILLILHHDFPEFVAENHF QFCNVIPAHCAQLRNLVLSAYPSSFQKLPDPFREGLKVERIEEMREIPKIAGDIVAPLQA ANIKDIVDGVLQNESISDPAVRQLCDAILNPESKDTGLFFVPVEVDVVLVNALVLYIGQQ AAVEHASKGNTRSAFENSIHAALLEKIAQVLRPESRYYLLSAMANQLRYPNSHTYFFSFT ILRLFGVDYSEQDDSDIRQQIIRVLLERLIVHRPHPWGLIITLQELLQNRSYSFFHLPFI QAAPEIGRLFDALLQHIQQQSPRPIA NT seq 6921 nt NT seq  +upstreamnt  +downstreamnt atgaccttccctccccctcacccttccgcccaatcgtcgattgcttctggcaccgataaa tcttcttcgaccaggaccgatattggtgcctggggtcggtccgtgtcgcagtccggcgca cgtcgtgggttgactccactcgcgaccaacatatcctccgccgctccccccacggcttcc cggggcttggacgcaggccttggggtttcgacaccgtcttcgttctctgccgtgctgagt tctgccaggggtctctccggtggaagtcccaaacacacatcatcgcccttcacatcattg caatctggctcgcaacagcacgcaacaaccctctcgtctcctaaattccgagctcacacc ccttccatagggtcccatttggcctctgctacaggctccaccccgggtggaggaggtact gggggaggaggtggtgggccgggatcttccagaggcgtcttctcgccgctctcgtccgga acaaccgtgaattctcccacaggcttcgcttctgacaagccgggctccacagctgcccac tcgagccaatcgtcgctcaccaaaatctccattgcccaggtattcctgttgctggattct attacagagaaagaaggaaaagagaagtgggagacaaaggctgcccaaatacacaagctt gtgacatcgaacggaatggaggttttttccaaatactttcgccgcctcctaacaggaaat gcgccccaaatcttcccgggcgtcaacaagtccgttgagaatgcgggcaactaccctctc cttgtccaggagctgcagaaagtgtcctcggacatggagcagtctcagaaaatcgctgag acagtagatacttctgaaggagatatcttccgcgacttcgacctgtctactttcctggat catttccgacttgacccagttgtcaaggttgcacttgccttagcctttaagctgactagc aagtcagatcttcgtgccaaagccgatgccatcctctcgaattccattgcccctttcttg cagagcttggcgagtcccaccgaagtgaccaaggattactctaacgccttccttggcatg acgattgaacgtttcatcttataccctccccgcaactttaccgacgatgtcaaggcgaag ctggtttacgccgccaatctgcgataccaaaaacttggcttggatatgccattcgaagtt tcctccgccctacagatgttcaattttgtcaaccctcaatatgtcctggtgcgacaactg cacgccaagggagctcgtgctactgcaaatatcgagacgataagtgaagtgcttaattca gacccgaagaattggagtgaagaacatctagccagcgcccttctcttcatgatcttgtcg caatattgggaacaattctcgctagagacattcttaagtgcatataacgacaagccaatc aattggcccctggtgttccgccacttcgatcgcgagggcctccgagtggatccgaagcaa ttcaccaaattgtacagcgttctttccgctatgtcggtcaacgactcgtctttggatgtt caaaagctttggggtggagactgggagcatcgtgacacacagatgtcattcctgacagct tttgtggcctcccggatcgacccattgcagatcacgaatcttcgcgcaactttccccgct gacttcttcgaggacgcacctgatatcgtcaaattgcaaggcgagcgtgcggcgaagtca cctcttcggtccatggacgctatgaaggcaattttcgaccttgccttgttctcccaggct tcgtgggctgcgacagaaagccagctccttataaaagctgttgttcaatatgatctgccg gttttccttgtttctgctctggctattccgcagccgtggtccagtgtccagcagagcttc gtgctgcgcacattcattgtcttcatctcaaagcaagaggatgggtatcagcttgctctc cacggtgcctggcggcaagaccgacagtgggtagcagagcagcttttcaccactttcact caggatcccacgtccaccgctgtgatctacgagcacgccgctgcatacgggtggctcgat tatctccttgggttcaccaacggtcttgccctcgatctcgcctgttactcccaccgcaag agtccctttgaccttgagcagtgggttcggaatgccgctcagaaaggcgccattgatatg ggtggtctgctttctaagttcctgcgaatcaaggctgaggacgaattgcacgtccagcgg aaggaacagtctgctcatcaaatggtcagcctcgcagtcaagactgtttatacgcttttg tctgtgttggaggaatacgtcggggaccgcgaaaatctcacacctgtccagcgcatttgc attcagacataccctcgcctgatcaactacggtgaaggattcgatgatatcatcgacgcc aatggcgagaacggtaacacgttgcctgactcaattgacaagcagatgcaagagctcttt ggtaaaatgtaccacgaggaactctcgctgcgtgagatgctggagttgatgcgaaaatat aagtcttcgcgcgatcccacagaacaagatctgttcgcttgcatggtgcacggcctggtc gacgaatatcattgctaccacgagtacccgctagaggctctgacaaagaccgcggtcatg tttggtggcatcatcaacttccgtcttgttgacggcatcactctgaaggtcggcctcggt atgatcctcgaggctgtccgcgagcatgaaccccacgacccgatgtacaagttcggcgtg gaagcgattgagcagttgatcaaccgtcttcccgagtgggctggtttctgccacctgctc ttccaaatcccctctcttcaaggcacgcccatctaccaaaaggcagaggaggtgctccgt gaacagggaaaccagatcggcgaagcggagacagggcccttcgacggtcttgcttctgtg cctctcactaatggcaattctgtcggctcgcccatcggcgatggctccgtgcgcaagttc cgttctattcaacttgacccacctcttcgatctgaactctacgaagacccggacgaagac atccaagacaagattcttttcgttcttaacaatgtttccgaacagaacattgacgagaaa cttgaggatctgcgagaagttttgcgtgaccaacatcaccagtggttcgccgcatacctg gtggaagaacgtgccaagttgcaacccaatttccagcagctctatctcgaccttcttggg cgcattggcgacaagatcctctgggccgaggtcctgcgggagacctatgtcagcgtcgct aagttgattaactcagaaggcaccttaagctcgtcaaccgatcgcggccacctgaagaac ctcggtgcttggcttggttcgctgactattgctaaagacaaacctattaagcacaagaac atctacttcaagggcctacttctggaaggttatgatacccaacgcctcatggttacgatc cccttcacctgtaaagttcttgtgcaggctaccaaatccacggtcttcaagccccctaac ccctggctgatggatattttgggcctgctgttggagctttatcatttcgccgagttgaag ctcaatctcaagttcgagattgaagtcctctgtaaggatcttgatcttgaccacaagaca attgagccggcaatcgtcattcgcgatcgcgctgcacatgtcgaggagccgctgcctact gttaacgccccagagggtctcactgagccatttgaagacttgtccctcagcgctatcaac ccagccgtccggagcgagaggttgtctccggcagccatcatgtcaacactgccgagcctt gacaagattcttgttctgccctcctcggccagcagcatggtcgatcccagcattctcaaa cagattgtgcacaccgccgtcgagcgcgccatcgccgagatcattacccctgtcgttgag cgctctgttaccattgcgtccatttccaccgtacagcttgtctccaaggactttgctatg gagcctgatgaagaacgcgtgcgccatgccgcgggaattatggtccgacaacttgccggt agcttggcacttgtcacctgcaaagagcctctgaaggttagcatgaccaactacatccgc atgattcagcaagactactctgagcagcctatgccagagggcttgattcttatgtgtgtg aacgacaacctggatgctgcctgtggcattgtcgagaaagctgcagaagaaaagtcgctg cctgagatcgagaaggtgattgagcctcaattggaggcccgtcgtcgccatcaggccagc cgctctaacgaccccttcattgatccttcaatgaaccgctggggattgttcattccggag ccttaccggcaagcgcctggtggtctaaacaaggagcaactcgccatctacgaagagttt gcccgtcaatctcgcgggccggcgccatccacggatgcatcggccggtcgccaactcccc gacgtgcttggggaatcctaccctgctattccaaacctttccacccccgctgagcagccc gccattcctcacagaactccccaggcgcagcctgccatctctcaaatgccccccgttcag accaacgggttcctcgacgcccagagcccccgagaaagagtggaaagccttgtctccgac ctccagcagtctgctcgcggcgctcctgaagaacacgttaaggatcttggcagagatagt gcggttcttcaagaatacaatcaggcactgcgtgccatcattcactcaacgaatggagag gagctggcacgactgacctctttgaaggtttgcacccttttgtattcccagccccatgga tctcttgagattgaagttctcgtgcaccttcttgccaagctgtgcgatatgtccagtctc attgctcggtacacgtgggcactcctctccgaagttgatgatgagcacatgttcaatgtg ccggtcaccgttgctctcattgacgcaggccttctcgacatccgccgggtcgatacgaac ctgacccgactcattctttccaggaatgttcccgctttggagttgctgggcaacttgatg gatcgcgttcttttcaatgaagaaccctctgcccttcgatcagacttctccggcagtcta gatgccatgagccagtggcttgctgaggatgcaagcgttgctcccggtctcgaaatcgtg cgaaagctgcgcgagtctggtattcccgaggtcgtaaaccctctccttggtgaccaagcc aggtccaagcgagaccaaatggagtacatcttcagcgagtggatcggtatctacaaggcc cccggtgcgactgaccgcacattccactctttccttcaggacctccacaaccgccaagtg atgaacaaccaggaggattccgcactattcttccgtctcagcatcgacatttccgtcgcc atgtttgagcatgagtctcagaaccccaacggcagccttgacgaggccttcctctacatc gatgccctcgctaagctcgtgattcttctcgtcagattccagggcgagagcgctggcgcc gtcaaagccaataaggctacgtacttcaactccattctgtctctcttggtcctggttctc aaccaccaccaggtcatgagaggagaagctttcaaccagcgtgtattcttccgtctcttc tcaagcattctgtgcgagtactctatgaatggcctccagcacactgagcagcaccaggga atgatcttcgccttggccaacaaattcctctccttccagccccgttacgtgcccgggttt gtttatggctggctttgcttggtctcccaccgggtgttcatgtctgacatgctcaacatg cccgatcgcgcaggatgggcgccttactgcgaaatcatgcaagcattgctgtcctacatg ggcgagcaactaaaggctgtcaacattacatacgttgctaaagatctatacaagggcgtt ctccgtatcttgttgattctgcaccacgatttccccgagtttgtggctgagaaccatttc cagttctgcaatgtgatcccggctcattgcgctcagctccgtaaccttgtcctcagtgca tacccctcgtcattccagaaacttcctgatcctttccgcgaaggcttgaaggtcgagcgc atcgaggagatgcgggaaattcccaagattgctggtgatatcgttgctcctttgcaggct gccaacatcaaggacatcgttgacggtgtgctccagaacgagagcatctccgaccctgct gttcggcagctttgcgacgccatccttaaccccgaatccaaggacactggcctcttcttt gtccccgtcgaggtggatgttgtcctggttaacgcgcttgtcttgtatattggtcaacaa gctgcagtggagcatgcatccaagggcaacacccgcagcgcctttgagaactccattcac gcggctcttttggagaagatcgcccaagttctgcgacctgaaagtcggtactacttgctt agtgcaatggccaaccagctccgctaccccaacagccacacctacttcttcagcttcacg attctccgtttgtttggcgtggactactccgagcaggatgactcggatatccgccagcaa atcattcgtgtgttgttggagcggctgattgtccaccgcccgcatccatggggtctaatc atcaccctgcaggagctcctccagaaccggagctactcattcttccatctcccctttatt caggcggcacctgagattggccgtcttttcgacgctcttctccaacacatccaacaacag agccctcgccccattgcctag

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