Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1039
Help
Entry
PC1_1039 CDS
T00934
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00190
Oxidative phosphorylation
pct00860
Porphyrin metabolism
pct01100
Metabolic pathways
pct01110
Biosynthesis of secondary metabolites
pct01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PC1_1039
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PC1_1039
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pct01006
]
PC1_1039
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pct03029
]
PC1_1039
Enzymes [BR:
pct01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
PC1_1039
Prenyltransferases [BR:
pct01006
]
Compound prenylation
Protoheme farnesyltransferase
PC1_1039
Mitochondrial biogenesis [BR:
pct03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
PC1_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF3040
Motif
Other DBs
NCBI-ProteinID:
ACT12088
UniProt:
C6DB46
LinkDB
All DBs
Position
complement(1210628..1211518)
Genome browser
AA seq
296 aa
AA seq
DB search
MIKQYLQVTKPGIIFGNLISVIGGFLLAAQGRIDYPLFLATLVGVSLVVASGCVFNNVID
RDIDKKMERTKNRVLVKGLISLKVTLVYASLLGIAGFALLYIAANPLAMWLAVMGFVVYV
GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVSNQFDAGALILLLIFSLWQMPHSYAIA
IFRFKDYQAANIPVLPVVKGISVAKNHITLYIVAFAVATLMLSLGGYAGYKYLIVAAAVS
VWWLGMALSGYKNAIDDRVWARKLFVFSIVAITSLSVMMSVDSMAPAHEVLLTYLR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaatacctgcaagttactaaaccaggaattattttcggaaatctgatttcc
gttatcggtggatttctccttgcggcccaaggccgcattgattatcccctgtttctcgcc
actcttgtgggggtgtcgttagtcgttgcgtctggctgcgtatttaacaacgtcattgac
cgcgacatcgacaagaaaatggagagaaccaaaaatcgggttctggtaaaggggctgatt
tcactgaaggtaacgctggtttacgcatcgctgttaggtattgcgggctttgctctgctg
tacatcgcggctaacccgctggccatgtggctggcggtgatgggcttcgttgtgtatgtc
ggcgtgtatagcctgtatatgaagcggcattctgtttatggcacgctgattggcagcctg
tcaggcgcagcaccaccggttatcggttactgtgccgtcagcaaccagtttgatgctggc
gcgttgattctgctgctgatctttagcctgtggcaaatgccccattcatacgcgattgcg
attttccgcttcaaggattatcaggccgccaacatcccggtgctgccggttgtgaaaggt
atctccgttgcgaaaaaccacattacgctgtatatcgtggcgtttgcggtcgcaacattg
atgctgtctctcggcggttatgctggctacaaatatctgatcgttgccgcagccgttagc
gtgtggtggttgggcatggcgctgtcaggctataaaaacgcgattgatgaccgtgtatgg
gcaagaaaactgtttgttttctccatcgttgcgattacctcactgagcgtgatgatgtct
gtggattcaatggcgccagcgcatgaagttctgctgacctacctgcgttaa
DBGET
integrated database retrieval system
