Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4292
Help
Entry
PC1_4292 CDS
T00934
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pct03016
]
PC1_4292
Transfer RNA biogenesis [BR:
pct03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PC1_4292
Prokaryotic type
Methyltransferases
PC1_4292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
GTP_EFTU
ABC_tran
Roc
Arf
AAA_28
Gtr1_RagA
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ACT15306
UniProt:
C6DK97
LinkDB
All DBs
Position
complement(4858441..4859805)
Genome browser
AA seq
454 aa
AA seq
DB search
MSNTDTIVAQATPPGRGGVGILRVSGRAAAEVAQAVLGKLPKPRHADYLPFRDANGTTLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPNVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGVFSTRVNQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIESQLNGVMADLDAVRAEAHQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL
FMVDGTTTQATEPEQIWPEFMARLPKTLPITVVRNKADVTGETLGIEDVNTHSLIRLSAR
TGDGVDTLRDHLKQSMGFTSNTEGGFLARRRHLQALELAAQHLIQGKEQLVSAYAGELLA
EELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataccgacaccatcgtcgcccaagccacgccaccgggacgcggaggcgtgggt
attttacgcgtatcaggacgggccgccgccgaggtggcacaggccgttctgggtaagctc
cctaaaccgcgtcacgccgattatctgccgttccgtgatgccaacggcaccacgctcgat
cagggtatcgccctctggtttcctggcccaaactcctttaccggtgaagatgtgttggag
cttcaaggacatggtggtccggtcattcttgatttgctcctgaaacgtattctgacactg
cccaacgtgcgcattgcacgccccggagaattctctgaacgcgccttcctgaacgacaaa
ctcgatcttgcgcaggcagaagctattgctgacctgattgacgccagttcggaacaggct
gctcgatcagcgctgaactctctgcaaggtgtattttccacccgtgtaaatcagttggtg
gaagcacttactcacctgcgaatctacgtcgaggctgccatcgacttcccagatgaggag
atcgactttctctccgatggcaaaattgagtcacagctcaatggcgtgatggccgatctg
gatgccgtccgagccgaagcacatcagggtagcctgctgcgtgaaggaatgaaggtcgtg
atcgcgggtcgtcctaatgcgggtaaatccagcctactcaatgcgttagcaggtcgtgaa
gccgcgattgtgacggatattgcaggaaccacgcgcgacgtattacgtgaacatatccac
atcgacggcatgccgctgcatatcatcgacaccgccgggctacgcgatgccagcgacgaa
gtggaacgcattggtattgagcgtgcctggcaggaaatcgagcaggccgatcgcgtacta
ttcatggtcgatggcaccactacgcaggcaactgaacctgagcagatctggccggaattt
atggctcgcctgccaaaaacgttgccgattaccgtagtgcgcaataaggctgacgttact
ggtgaaacgcttggtatcgaggatgtgaacactcactcacttatccgtctttccgcccgt
acgggtgacggtgtggatacgctacgcgatcatctcaagcaaagcatgggattcaccagc
aacaccgaaggcggttttctggcacgacgccgccacctgcaagcactggaactggcagcc
cagcatctgattcaggggaaagaacagctggtgagcgcctacgcgggcgagctgctggca
gaagaactacggctggcacagcagtccctgagtgaaatcaccggtgaattcacctctgac
gatctgttaggccgtatcttttcgagcttctgtatcgggaagtaa
DBGET
integrated database retrieval system
