Psilocybe cubensis (magic mushroom): JR316_0003646 Help Entry JR316_0003646     CDS       T08288                                  Name (RefSeq) Pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism pcub  Psilocybe cubensis (magic mushroom) Pathway pcub03040   Spliceosome Brite KEGG Orthology (KO) [BR:pcub00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     JR316_0003646  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcub03019]     JR316_0003646    03041 Spliceosome [BR:pcub03041]     JR316_0003646 Messenger RNA biogenesis [BR:pcub03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      JR316_0003646 Spliceosome [BR:pcub03041]  Complex B   Other components    Prp19-related factors     JR316_0003646  Complex C     JR316_0003646 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C Suf TPR_2 ODAD1_CC NRDE-2 DUF7231 Motif Other DBs NCBI-GeneID:  71969967 NCBI-ProteinID:  XP_047751791 LinkDB All DBs Position 3:2581329..2584762 Genome browser AA seq 995 aa AA seqDB search MPSVAQKKTSFEELSAYFPLTFPTPSPTTHPDLISTQDLHREEDLLRNPDSFRAWWSAIN GMRENYTALQKTEANMSKFPENVLTVLGPLTTPLARQTLQRLTYTYEAALIQFPNSFKLW KSYLNMRMSFVLGKPVVKKKAGGKKKFPEMKDALEEAAEDLQEWESSLDPIVGWEEWKAL IATFERSLMWLPKLPRLWLMYISIFYHPRCPSILSYTHARRTFDRALRTLPPSLHARIWT QYLLWAEKKGGEVTVVVYRRYLTVDPSLTERFTGLLLSPANSAPRPLEAAKLLLSLARKA ARGEYISPEGKSPYQLLEDWINVVENFSEEVGLDVDDTDDSNKAVAEAEVAEIEASKTDS STPSAASTSGPLIRMAGPAIPVTADGKPTAPYSEDEDPASPRKLNIEHIIRKDGLAVYKD QAGRLWTGLATYWIRRAELDRARDIFEQGMKNVLTSRDFTQIFDNYAEFLEAILDNIIKS QEVGEIDEEDTEDVDAEMDRRMKELDDLTDRRPFLYNDVMIRRNPNDVQEWEKRVALWGE NDEEVIKTYTKALETINPRKATSNLHRLYIHFAKFYEEGGASGEAEPDLNSARKILEKAT KVNFKLVEDLAEIWCEWSEMELRHENYDEAIRVMQRATAIPKNVKINYHDHSLSAQARLF KSLKLWSFYVDLEESYGTIQTTKAAYDKILELRIANAQIIVNYAAFLEDNEYFEDSFKVY ERGVELFTFPVSFEIWNIYLSKFVKRYGGTKLERARDLFEQALEKCPPKSCKPLFLMYAQ LEEDFGLAKRSMSIYERATQAVADEDKFEMFSIYIAKATANFGLPATRPIYERALEVLPD RQTAEMCLRFAALERKLGEIDRARAIYAHASQFCDPRVNPHFWSEWNTFEIETGSEDTFR EMLRIKRSVQAQFNTEASYLSAQTIGARSGAKNTEESGASQDAMAAADKQARNGPAFVAA KKSVAVPEEGAESAPAPAPQAKNDEEIQISDDEDI NT seq 2988 nt NT seq  +upstreamnt  +downstreamnt atgccttccgtggcgcagaaaaagacctcatttgaggaactttctgcctattttcccttg acatttcctaccccgtcacctacaacccatcccgacctcatttcaacacaagacctccat cgagaagaagatttgttacgaaatccagattcgtttcgagcatggtggtcagctatcaat ggcatgcgcgagaactacacagcactgcagaaaacagaggcgaatatgtcgaagtttcct gaaaacgtccttaccgttcttggacctctcacaacacccctcgcgcgtcagacacttcag cgtttgacatatacgtacgaagcagcactaatacaatttccgaactcttttaaactatgg aaatcatatcttaatatgcgcatgtcttttgtactagggaaacctgtcgtcaagaaaaag gctgggggtaagaaaaagttccccgagatgaaggacgctttggaggaagctgctgaggac ttgcaggagtgggagtcctctttagaccctattgttggatgggaggagtggaaagctctc atcgctacttttgaacgctctctaatgtggctgcccaagcttccgcgtttatggctcatg tacatctcaatattctatcacccccgatgtccttcaatcctatcatacacccatgctcga agaacgttcgatcgcgctttgaggacgctccctccttcacttcacgcacgcatatggacc cagtatcttttatgggcagaaaagaaaggtggcgaagtgacggttgtggtgtacagacgc tacctcacagtggatccttcactgaccgaacgttttacgggtttgttgttatcacctgct aattctgcacctcgtcctttggaagccgcgaaactgctcctctccttagctagaaaggct gccagaggagagtatattagcccggaaggcaagagcccgtaccagctcttggaagattgg ataaatgtcgttgaaaatttctctgaagaggttggcttggatgttgatgacactgacgac tccaataaagcggtagctgaggctgaggttgcagaaatcgaagcatcgaaaacagattcg tcaacgccttctgctgcttccacatctgggccactcatccgtatggcaggtcctgctatt cctgtgacagctgatggaaagccgactgcaccttattctgaagacgaagaccctgccagt ccacggaaactcaacattgagcatatcatccgaaaggatggcttggctgtatacaaagat caagctggacgtttatggactggtctggccacctattggattagacgtgctgaattagac cgggccagggatatatttgaacagggcatgaagaatgttttaaccagccgcgacttcacg caaatctttgacaattacgcagaattcctagaagctatcctcgataatatcatcaaaagc caggaagttggtgaaatcgatgaagaagacactgaggatgtggacgcagagatggatcga cgaatgaaggaacttgacgatttgacagatcgccgacctttcctatataacgatgtcatg atccgcagaaatcccaatgatgtgcaagaatgggaaaaacgagtggctttatggggagaa aatgatgaagaggtgatcaaaacctacaccaaggctcttgaaactatcaaccctcgaaaa gcaacttctaaccttcaccgattatacattcattttgccaaattttatgaggagggcggc gcatctggcgaagccgaaccagatcttaatagtgcacgcaagattttggagaaggcaacc aaggttaacttcaaactcgttgaagatttggccgagatatggtgtgagtggtcggagatg gaattgcgccatgaaaactatgatgaagcaattcgcgttatgcaaagggccaccgccatc cctaagaatgttaaaatcaattatcatgatcactcactttcggcgcaagcacgtctattc aaatcattgaaactttggtcgttttatgtagatcttgaagaatcatatggtactattcaa acgacgaaagctgcttacgataagatactggagctacgtattgcaaacgcgcagatcatt gtcaactacgcagcatttctggaggacaatgaatactttgaggacagcttcaaggtctat gagcgtggtgttgaactttttacgttccctgtctcgttcgaaatttggaatatctatctt tccaaatttgttaagagatacggcggaactaaactagaacgagcccgcgatctctttgaa caagctctggagaaatgccctccgaaatcatgcaaacccctcttcctcatgtatgcacag ttggaagaagatttcggtcttgctaagcgttctatgtcaatttatgaacgagctacccaa gctgtcgctgatgaagataaatttgagatgttctctatctacatcgcaaaggcaactgcc aactttggccttcccgccactagaccaatctacgagagggcattggaagtacttcctgac cggcaaactgccgaaatgtgcctgcgcttcgctgccctcgagcgcaagcttggcgaaatc gacagggcgcgtgccatttatgcgcacgcctcccaattctgcgatcctcgtgtcaaccca catttttggagcgagtggaataccttcgagatcgagaccggatcggaagatactttcaga gagatgttgcgcatcaagcgcagtgtccaggctcagttcaatacggaggcgagctacctg tcagcacaaaccatcggcgccagaagcggtgcaaaaaacacagaggaaagcggcgcctct caggacgctatggcggctgccgataaacaggcacgcaacggcccagccttcgttgctgct aagaagtcggtcgccgtcccggaggaaggtgcggagtctgcacctgctcccgctcctcag gcgaaaaacgacgaggagatccaaatttctgacgacgaggatatatag

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