Psilocybe cubensis (magic mushroom): JR316_0004726
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Entry
JR316_0004726 CDS
T08288
Name
(RefSeq) Transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0004726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0004726
Spliceosome [BR:
pcub03041
]
Complex A
U1 snRNP components
U1 related factors
JR316_0004726
Complex B
JR316_0004726
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
71971047
NCBI-ProteinID:
XP_047750251
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All DBs
Position
4:complement(1762183..1764733)
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AA seq
699 aa
AA seq
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MSALPYLGIAIPPLPQGWTEHLGPNGQPYYYNAVTRESTYIRPTPQISPIQPKKASKKEK
PLLKTPIPGTDWLKVTTTEGNIFYSHKVRKESVWVVPDELKPALDALQAKENESRGKSAQ
KTKETTSIAKRKADDTVPISEVVLNKKAKVDEEGEEEDESESEEDNNEEDEEDWQREAAQ
QLAKEAEEERQRIRDTEKQREAEAEAQRTQVALKVAIPDRVDLSPEEGKALFKTLLREKD
INPLHPWDKSLPKFISDPRYVLLQSVTARREAFDEYCKERSRELRQSAVKKDKEMANPKE
DFERLLKEEVKSTRTSWTDFRRSWKKDRRFYGWGRDDKEREKRFREFLKELGELKREAAQ
KAERNFFALLKEHPFVTEGIAWKDAKKKIYKDPRYDAVGSSTLREELFNTFIKDRGFQHK
PEQNAALQPNSPTTYGQAEGEEREERRKKAVKEREEKVNAERRRLDADIERSKMGIDKEE
GERTFRTLLTDAIRESQVTWDDIVPQLKTDLRFTNSPLSLNHQLRLFHEHLSHLRDKQLT
GLHALFEAHAPSLATKFHTLPLETILSSAPAKKLGYNIDQIEADFDKWQRERTTAARIAF
DEMMEENSFVEFWGRLRKIGGEDVAGNLQIEGDDIGEDGEDKVDMKALAKNIDIREMENV
LKHDKRYITFEHIPDERERWIRDYISRLSAPKLSVHVDG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctctaccctatctggggattgcaattcccccactaccgcaaggatggactgaa
catctcggacccaatggccagccatattattacaatgcagtgacgcgtgaatcaacatat
attcgccctactccacagatttctcccatacaaccgaaaaaagccagcaaaaaagagaaa
ccgcttttaaaaacaccaattccaggcactgattggcttaaagtgacgactacggaaggc
aatatattttactctcataaagttaggaaagaaagtgtatgggttgttccagacgaatta
aaacctgccctggatgcccttcaagcaaaagagaatgagagtcgtggaaagtcagcgcag
aagacgaaagaaacgaccagcatcgcgaaacgaaaagcagatgatactgttcccatcagc
gaggtggtcctgaataagaaggctaaagtggatgaggaaggagaagaagaagacgaaagc
gaaagcgaagaggataacaatgaggaagatgaagaagattggcaacgtgaagctgcccaa
caacttgccaaagaagctgaagaggaacgtcagcgaattcgagacacagagaagcagaga
gaagcagaggcagaggctcaacggactcaagtggccttgaaagtggctattcctgacagg
gtcgacctttcccctgaagaaggcaaagcgctctttaagacattgctccgtgagaaggat
attaacccgttgcatccatgggacaagtctcttcctaagtttatctctgatccccgatat
gttcttctgcagtctgtgacggcgcggcgcgaagcctttgacgaatattgcaaagaacgc
tctcgggaactacgccaatctgctgtcaaaaaagacaaagaaatggccaacccaaaggag
gacttcgaacggcttttaaaggaggaagttaagagcacaagaacaagctggaccgatttt
agaagatcatggaaaaaagatcgccggttttatggatggggccgagatgacaaagaaaga
gagaaacgcttcagggagtttttgaaggaactgggcgaactcaaaagggaggccgcacaa
aaagctgagaggaatttcttcgctctcctcaaagaacatccatttgttactgaaggtatt
gcttggaaagatgccaagaaaaagatatataaagatcctcgctatgacgcggttggttcc
tcaactcttcgggaggaactgtttaatacatttattaaagacaggggatttcaacataag
cctgaacaaaatgctgcattacaaccaaattcaccgaccacgtacggtcaagcagaagga
gaggaacgagaagaacggagaaagaaagccgtcaaggaacgagaagagaaggttaacgca
gagcgtcgtcgtttagatgctgatatagagcggtcaaaaatgggaattgacaaagaagaa
ggggaaagaacttttaggactttacttacagatgctatccgcgagtcacaggtcacatgg
gatgatattgtgccccaactaaaaactgatctgcgcttcaccaactcgcctttgtctctc
aatcatcaattacgcctattccacgaacatctatcccatttacgagacaagcaattaacc
gggttgcatgcactttttgaagctcatgctccatcccttgccactaagttccacaccctc
cccttagaaacaattctttcttccgcaccagcaaaaaaattgggatataatattgatcag
attgaagctgacttcgataaatggcagagagaacggacaactgcagcgcgcattgctttt
gatgaaatgatggaagaaaattctttcgtggaattctggggccgtctgcgcaaaataggg
ggcgaggatgtagccggaaaccttcaaatagaaggtgacgatattggcgaagatggtgaa
gacaaggtcgatatgaaggcgttagccaagaatattgacatcagggagatggaaaacgtt
ttgaaacatgataaacgttatattacatttgaacacattccagatgaaagggaacgatgg
attagggactatatttcccgcttatcggcgccaaaattgtcggtgcatgtcgacggataa
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