Psilocybe cubensis (magic mushroom): JR316_0009260
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Entry
JR316_0009260 CDS
T08288
Name
(RefSeq) mRNA splicing protein smd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0009260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0009260
03032 DNA replication proteins [BR:
pcub03032
]
JR316_0009260
Spliceosome [BR:
pcub03041
]
Complex A
U1 snRNP components
Sm proteins
JR316_0009260
U2 snRNP components
JR316_0009260
Complex B
U1 snRNP components
JR316_0009260
U4/U6.U5 tri-snRNP components
JR316_0009260
Complex C
U2 snRNP components
JR316_0009260
DNA replication proteins [BR:
pcub03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
JR316_0009260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Gemin7
Motif
Other DBs
NCBI-GeneID:
71975580
NCBI-ProteinID:
XP_047746424
LinkDB
All DBs
Position
8:complement(2372293..2372964)
Genome browser
AA seq
124 aa
AA seq
DB search
MKLVRFLMKLNNETVTIELKNGSVVHGTITGVDMQMNTYLKTVKMTTRNRDPVSLDSLSI
RGNNIRYFILPDALPLDTLLVDDAPKPKGRKKEDIRGRGRGRGGDRGRGRGGGGRGGRGR
GRGF
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagatttttgatgaagctgaacaatgaaacagtgacgatagaactgaaa
aatggatctgttgttcatggaacaatcactggtgttgatatgcagatgaacacgtatctc
aagacggtgaaaatgacgacgcgtaatcgcgatcccgtttctctggactcactatccatt
cgtggaaacaacatccgctacttcatccttcctgatgccctgcctcttgatactctgctg
gtcgatgatgctcccaaacccaagggacgaaaaaaggaggatatcagaggccgtggaaga
ggccgcggtggagatcgtgggcgtggacgtggtggtggtggcagaggtggacgcggccga
ggacgaggattctga
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integrated database retrieval system
