Psilocybe cubensis (magic mushroom): JR316_0012156
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Entry
JR316_0012156 CDS
T08288
Name
(RefSeq) Thioredoxin-like 4A
KO
K12859
U5 snRNP protein, DIM1 family
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0012156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0012156
Spliceosome [BR:
pcub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
JR316_0012156
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Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
zf_RING_Vps8
DUF3192
Thioredox_DsbH
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
71978476
NCBI-ProteinID:
XP_047742678
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All DBs
Position
12:505923..506625
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AA seq
142 aa
AA seq
DB search
MSYFLPHLPSGWHVDEAIKSEEDRVVVIRFGHDWDSQCMTMDETLYSVAEKVQNFAVIYL
VDITEVPDFNKMYELYDQCTVMFFYRNKHIMIDLGTGNNNKINWAMDNKQELIDIIETVY
RGASKGRGLVVSPKDYSTRYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatttcctgccccatcttccttctggctggcatgttgacgaagctatcaagtca
gaagaagatcgtgttgtggttatcagattcggtcatgactgggatagccagtgtatgacg
atggacgaaacattgtattcagtggcagaaaaggtccagaacttcgccgttatttacctt
gttgacataacggaagttcctgatttcaataaaatgtatgagttatatgatcaatgcact
gtcatgtttttctatcgaaacaaacacatcatgatcgatctggggaccggtaacaacaac
aaaattaactgggctatggataacaaacaagaattgattgatataattgaaacagtatac
agaggcgcgtctaaaggtcgtggtctggtcgtgtctccgaaagactattcgacgcgctac
agatactga
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