Pectobacterium odoriferum: BCS7_21685
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Entry
BCS7_21685 CDS
T03424
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcv03016
]
BCS7_21685 (trmE)
Transfer RNA biogenesis [BR:
pcv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BCS7_21685 (trmE)
Prokaryotic type
Methyltransferases
BCS7_21685 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
GTP_EFTU
ABC_tran
Roc
Arf
AAA_28
Gtr1_RagA
SRPRB
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIU90379
LinkDB
All DBs
Position
complement(4929183..4930547)
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AA seq
454 aa
AA seq
DB search
MSNTDTIVAQATPPGRGGVGILRISGQAAAEVAHAVLGKLPKPRHADYLPFRDAKGTTLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLQRILTLSNVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGVFSTRINQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNGVMADLDAVRAEAHQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL
FMVDGTTTQATEPEQIWPEFMARLPKTLPITVVRNKADVTGEALGIEDVNTHSLIRLSAR
TGEGIDTLRDHLKQSMGFTSNTEGGFLARRRHLQALELAAQHLIQGKEQLVSAYAGELLA
EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgacaccatcgtcgcccaagccacgccaccgggacgcggaggcgtgggt
attttacgcatttctggccaagcggccgccgaagtcgcgcatgccgttctgggtaagctt
cccaaacctcgccacgccgattatctgccgttccgtgatgccaaaggcaccacgctcgat
cagggcatcgccctctggtttcctggcccgaactcctttacgggtgaagatgtgctggag
cttcagggtcacggcggtccggttattcttgatttgctcttgcaacgtatcctgacgcta
tctaacgtgcggattgcacgtcctggtgaattctctgaacgcgcctttctaaacgacaaa
ctcgatcttgcacaggcggaagccattgccgatctgatcgacgccagctcggaacaggcc
gcgcgctcggcgctgaactctctgcaaggcgtcttctccacccgtataaatcagttagtg
gaagcactcactcacctgcgaatctacgtcgaagctgccatcgacttcccagatgaagag
atcgactttctctccgatggcaaaattgaagcacagctcaatggcgtgatggccgatcta
gacgccgtcagagccgaagcgcatcagggtagcctgctgcgtgaagggatgaaggttgtg
atcgcgggccgccctaatgccggtaaatccagtttactcaacgcgttagctggtcgtgaa
gcggcgattgtcacggatatcgcgggaaccacgcgcgacgtattacgtgaacacatccat
atcgacggcatgccactgcatatcatcgacaccgccggactgcgcgatgccagcgatgag
gtagaacgcattggtatcgagcgagcctggcaggaaatcgaacaggccgaccgcgtgctg
tttatggtggacggcaccaccacgcaggcgaccgagcctgagcagatctggccagaattt
atggcacgcctgccaaaaacactgccgattaccgtggtgcgaaacaaagctgacgttact
ggtgaagcgctcggcatcgaagatgtgaatactcactcacttatccgactttccgcccgt
acgggtgaaggtatcgatacgcttcgcgaccacctcaagcaaagtatggggttcaccagc
aatacggaaggcggttttctggctcgacgtcgccacctgcaagcactggaactggcagca
cagcatctgattcaggggaaagaacagctagtgagcgcctatgcgggagaactgctggca
gaagaactgcggctggcacagcaggccttaagtgaaatcaccggcgagttcacctctgac
gacctgctaggccgtatattttcgagtttttgtattgggaagtga
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