Phascolarctos cinereus (koala): 110193408
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Entry
110193408 CDS
T05867
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110193408 (UPF3A)
03015 mRNA surveillance pathway
110193408 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110193408 (UPF3A)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110193408 (UPF3A)
mRNA cycle factors
P-body specific factors
110193408 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
110193408
NCBI-ProteinID:
XP_020820829
UniProt:
A0A6P5IQE0
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MRSEKEAASGAGGSGVGGAGRGSGGKEKPPLPPPPPPPPPPLPPPPASSRGGAAMEIQFR
RESPRREVETPPTAVSASGGGGGGSSSGGGGGGGSSKPREEKKTVLSKVVIRRLPPSLTK
EQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPDDILLFRDRFDGYVFIDSKG
LEYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYRKFLETYCVEEEKISANPETLLGE
IEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEE
RRKRKEAEKQKKIVEKEIRIKLLKKPEKGEEPAAEKQKEKGEEADIEEGKWEKSPSSGSI
KSKPLESSLKELKEKSQNDSDKEQRDIDRRFREKEPERQRYRLDDGRKHRTHYEFDKFLR
RNEDELKWGKGYNQDRGKKGNHNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQL
YQPVRIRTRTGSTSKTPDCTAKSSEEADRKGEVENPAGAASEKSEEAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccgagaaggaggcagcgagcggggccgggggctctggcgtcggcggggccggg
cggggatcgggtggcaaggagaagccgccattgccgccgccaccaccgcctccgcctcca
cccctgccaccgccaccggcatcttcccgcggaggggcagcgatggagatccagttccgc
cgcgagtcgcctcggcgcgaagtggagacacctccgaccgccgtctcggcctcgggcggc
gggggtggcggaagcagcagcggcggtggcggaggaggcggcagcagcaagccgcgggag
gagaagaaaacggtcctgagcaaggtagttattcgtcgacttcctcccagtctaaccaag
gagcagttagaggagcagttacatccacttcctgctcatgattactttgaattttgtaca
gctgatcccagcctttatcctcatctttactcaagagcatacattaattttcgaaatcct
gatgacatccttctttttagagaccgttttgatggctatgtcttcattgatagtaaaggt
ctggaatatcctgctgtcgtagaatttgctccattccaaaagatttccaaaaagaaatta
aagaaaaaagatgccaaagcagggagcattgaagaagatccagaatataggaagtttcta
gaaacctattgtgttgaggaggagaaaataagtgccaatcctgaaactcttttgggagag
attgaggcaaagacacgggaactcattgctagaagaacaacacctcttttggaatatatt
aaaaatagaaaattagaaaagcagagaattcgagaagaaaaaagggaagaacgaaggagg
agggaattagaaaagaaacgcttgagagaagaagagaaaagaaaacgcagagaagaggaa
agacgtaagagaaaagaagctgaaaaacagaagaaaattgttgagaaagagataagaatc
aagcttcttaaaaaacctgaaaagggagaggaaccagcagcagagaagcaaaaagaaaaa
ggagaagaagctgatattgaagaaggaaaatgggaaaaatcccccagctctggaagcata
aaatccaaacccttggaaagttcactgaaggaactcaaggaaaagtcacaaaatgacagt
gataaagagcaaagggatatagatagaagatttcgagaaaaagaacctgaaagacaaagg
tatcgcttggacgatggcagaaaacatagaactcattatgagtttgacaagtttttgaga
agaaatgaagacgagctgaaatgggggaaaggatacaaccaagacagagggaagaaaggg
aaccacaactacagcttcactgtggaggcagtagacaaactgggtaaagaggacaagtgt
gatgacatggcatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagtta
taccagccagttcgcattcgaacacgtacaggctctacaagtaaaactcctgactgcact
gcaaagtcctctgaagaagctgatagaaaaggcgaggtagagaatccagcaggagctgct
tctgagaagagtgaagaggcagagtaa
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