Phascolarctos cinereus (koala): 110199481
Help
Entry
110199481 CDS
T05867
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110199481 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110199481 (CLP1)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
110199481 (CLP1)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110199481 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
110199481
NCBI-ProteinID:
XP_020830016
UniProt:
A0A6P5J7A6
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MAEESSDEKKPLAKFELERETELRFEVEASQSAQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREYRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENISETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLKR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaatccagtgatgaaaagaagcccctggctaagttcgaattagaacgggag
acagaactacgttttgaggtggaggcctcccagtcagcccagctggaactactggctggc
atggcagagatctttggcacagaactgacacgaaacaaaaaattcacttttgatgcaggt
gccaaagtcgctgtcttcacttggcatggctgttctctccagctgagtgggcgcactgaa
gtagcttatgtctccaaggacactcccatgctcctttatcttaacactcacactgctctg
gaacaaatgagacggcaggcggagcgtgaggaagagcgaggtcctcgggtgatggtagtc
ggccctacggatgtgggcaagtccacggtgtgccgccttttactcaattatgctgtgcga
ctaggccggagacccacttatgtggagctggatgtcggccaaggctctgtgtccattcct
ggcaccatgggagccctttacattgagcgacctgctgatgtagaggagggcttctctgtg
caggccccattggtctatcatttcggctccactacacctggcaccaacatcaagctttac
aataagattacatcgcgcctcgcagatgtcttcaatcagcgttgtgaggtgaaccgccga
gcctctgtcagtggctgcgtcattaacacctgtgggtgggtcaagggctctggctaccag
gccttggtgcacgccgcttctgcttttgaggtggatgtggtggtggtgctggaccaggaa
cgactgtacaacgagctgaagcgtgacttgccccactttgtgcgcaccgttctgctcccc
aagtcaggaggagtggttgaacggtcgaaggacttccgcagggaatatagggatgagcgc
atccgagagtatttctatggtttccgaggctgtttctatccccacgccttcaatgtcaag
ttctccgatgtgaaaatctacaaggtgggggctcccaccatcccagactcatgtctccct
ttgggaatgtcacaggaagacaatcagctgaaactggtaccggttaccccagggcgagac
atggtgcatcacctcttgagtgtcagcacagctgagggtactgaggagaacatctctgag
accagtgtggctggcttcattgtggtgactagtgtggacctggagcaccaggtttttact
gtgctctctccagcccctcgcccactgcccaagaacttcctcctcatcatggacatccgc
ttcatggatctcaagcgctga
DBGET
integrated database retrieval system
