Phascolarctos cinereus (koala): 110200457
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Entry
110200457 CDS
T05867
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04514
Cell adhesion molecule (CAM) interaction
pcw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110200457 (CNTN1)
04517 IgSF CAM signaling
110200457 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcw04515
]
110200457 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcw00537
]
110200457 (CNTN1)
Cell adhesion molecules [BR:
pcw04515
]
Immunoglobulin superfamily
Contactins
110200457 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcw00537
]
Others
110200457 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
fn3_SORL1
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
110200457
NCBI-ProteinID:
XP_020831458
UniProt:
A0A6P5JJY4
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MTKLNEAFLELNLSLAAYKMKMWFLMSYLITMCFISCLAVAEDGKGFGPIFEEQPIDTIY
PEESPDGKVSLNCRARASPFPVYKWRMNNWDIDLTNDRYSMVGGNLVINNPDKLRDAGKY
FCLASNIYGTVRSTEATLSFGYLDPFPPEERVEVKVKEGIGLVLLCDPPYHFPDDLSYRW
LLNEFPIFITMDKRRYVSQTNGNLYIANVEGTDRGNYSCFVSSPSITKSVFSKFIPLIPL
SDRTTKLYPADIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMSG
AVLKIFNIQLEDEGTYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEADIGSDLYWPC
VATGKPIPTIRWLKNGYAYHKGELRLYGLTFDNAGMYQCIAENAHGAIYANAELKILAMA
PTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIR
NITRVDEGTYTCFAENNRGKANNTGTLLITDATRITLPPANADVTVGENATMQCSASHDA
ALDLTFIWSLNGYVIDFNKENSHYMRNFMIDSNGDLLIKNAQLKHAGRYTCTAQTIVDNS
SASADLVVRGPPGPPGGVRIEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDA
KTDPPNIEGNMESARAVDLIPWMEYEFRVVATNILGTGEPSLPSNRIKTEGAAPNVAPSD
VGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFGGKEWKKVTVTNPDIGRYVHKDE
TMSPSTEFQVKVKAFNSKGDGPFSLTAVIYSAQDAPNEAPTDVSIKVLSSSEISVSWKHV
LEKTVEGYQIRYWAAQDKEAAAQRVQVSSQDYSAKLENLLPDMQYSVEVRAYNSAGYGPP
SDVVDVYTRKAPPSQPPRIISSVRSGSRYIITWDHVRAMSNESTVTGYKVLYRPDGEHEG
KLYSTHKHSIEVPIPRDGEYIVEVRAHSDGGDGVVSQIKISGASEVSPSLFGLLLPAFGI
LAFWEF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacttaatgaagcttttttggagctgaaccttagccttgctgcatacaagatg
aagatgtggtttttgatgagttacctaattacaatgtgcttcatatcatgtctagcagtt
gcagaagatggcaaaggatttggaccaatttttgaagagcaaccaattgataccatttat
ccagaagaatcaccagatggaaaagtatcattgaactgccgggcccgagctagtcccttt
cctgtttacaaatggagaatgaataactgggatattgatctgacaaatgatcgctacagc
atggtaggagggaatctggtaatcaacaaccctgacaaattgagagatgctggaaagtat
ttctgcttagcttcaaatatctatggaacagttagaagcactgaagcaactttaagtttt
gggtatcttgatccttttccaccagaggaacgagtagaggtaaaagtgaaggaggggata
ggccttgttcttctgtgtgatcctccttaccactttccagatgatcttagctatcgttgg
cttctaaatgagtttcctatattcatcacaatggacaaacgacgatatgtatctcagacc
aacgggaatctatatattgcaaatgtagaaggaactgatagaggcaattattcatgcttt
gtatcaagtccttcaattacaaagagtgtattcagcaaatttatcccactcatccctctt
tctgaccgcacaacaaagctgtatcctgctgatattaaagtccagttcaaggacacatat
gcactgatgggccataatgtaacattagagtgttttgcccttggaaaccctgttcctgag
atacggtggagaaaagttctggaaccaatgccaagcacagctgagattagtatgtctggg
gcagttcttaagattttcaacattcagcttgaagatgaaggaacttatgaatgtgaagct
gagaacatcagaggaaaagacagacatcaggcaagaatttatgtccaagcatttcctgaa
tgggtagaacatatcaatgacacagaggcagatataggcagtgatctatactggccttgt
gtggctactggcaaacctatccctacaatcagatggttgaaaaatggatatgcgtaccat
aaaggtgaactgagactgtatgggctgacctttgataatgctggaatgtaccaatgcata
gctgaaaatgcccatggagcaatatatgcgaatgctgagctcaagattctggctatggct
cccacctttgaaatgaatcctatgaagaagaagaccctggcagctaaaggaggacgtgtt
ttaattgaatgcaaacctaaggctgcacctaaaccaaaattttcatggagtaaaggaaca
gaatggcttgttaatagtactcgaattctcatttgggatgatggtagcctcgaaattagg
aacatcacgagggtagatgaaggcacttacacatgttttgcagaaaataacagaggaaaa
gctaataatactggaactctattaattacagatgccacgagaattactttacccccagct
aatgctgatgtcactgtgggtgagaatgcgaccatgcagtgttctgcgtcccatgatgct
gctctggacctcacatttatttggtctttgaacggatatgtgattgattttaacaaagaa
aatagtcattacatgaggaattttatgatagattccaatggtgacttgcttattaaaaat
gcacagctgaaacatgctggacgttatacttgtactgctcagacaattgtggataattct
tctgcttcagctgaccttgttgttcgaggcccaccaggcccaccagggggtgtgagaata
gaagacattagagatacttctgtagcactgacatggagccgtggctcagataatcatagt
ccgatatctaaatattctattcagaccaaaactattctttctgatgactggaaagatgcc
aaaacagatccaccaaatattgaagggaatatggaatcagcaagagcagtagacctaatc
ccatggatggagtatgaattccgggtagtagcaaccaatattttgggaacaggagaaccc
agtctaccatcaaacagaatcaaaacagagggtgctgcacctaatgtggctccctcagat
gtaggaggaggaggtggaagcaaccgtgaattgacaataacgtgggtgcctttgtcacga
gaataccactatggcaacaattttggttacatagtggctttcaagccatttggtggaaaa
gagtggaaaaaagtaacagttactaatccagatattggccggtatgttcataaagatgaa
acaatgtccccttccactgaatttcaagtaaaagtgaaagcctttaacagcaaaggagat
ggaccattcagtctaacagcagtcatttattctgcacaagatgcacccaatgaagctcct
acagatgtgagcataaaagtcctatcttcttctgaaatctccgtttcttggaagcatgtt
ttagaaaaaactgtggaaggctatcagattcgttactgggctgcacaggataaggaagca
gctgcacagagagttcaagtcagcagtcaggattattctgccaaactggaaaatttgcta
cctgatatgcagtattctgtggaggttagggcctataacagtgcaggatatggacctccc
agtgatgtggttgatgtctacacaaggaaagcacccccaagtcagcctccaaggattatt
agttcagtaagatctggttcaaggtacattatcacctgggatcatgtcagagcaatgtca
aatgaatctacagtgacaggatataaagtgctctacagacctgatggtgaacatgaaggc
aagttgtattcaactcataagcattcaatagaggtcccaatccccagagatggagagtat
attgtggaggttcgagcacacagtgatggaggagatggagtggtatcacaaattaaaatt
tcaggtgcatctgaagtttcacctagtctctttggcttattgctgcctgcctttggcatc
ctagctttttgggaattctga
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