Phascolarctos cinereus (koala): 110218749
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Entry
110218749 CDS
T05867
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110218749 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110218749 (DCP1B)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110218749 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
110218749 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
110218749
NCBI-ProteinID:
XP_020857336
UniProt:
A0A6P5LN66
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All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKSLTQYEQLKARQGARAGISPMILNSGEGKEVDILRMLTKAKDEYTKCKTCSE
PKQITSSSAIYDNPNLIKPIPVKPGEGQHQRVPQQGQNLDPEPQHLSLTTLFGKPDKAAY
QEVTEQKSQLLPPAPQQQQEKPPIRQRVVRSLSYEEPKRNSPTPEKQLCPAIQKLMVRGT
DLHPVSELPETRLCENGSVHPVGEVFTGLFQPVTPHSIGTSHKVQSTSGAQGLLEKLQGT
PGSVSKLESSTSVPTSSTAQIFSGNSTPAAPAAQIKSMGQPQLVYFNGSLPSQTLGPQTL
RKEESKVSRQTLPISGNQTSSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVVTQ
NARTLKPLEAWIDKTSSTEKQTPLFQVISPQRIPATVAPSLLMSPMVFSQPTPSSPKVGE
SGLLPLGSKEPSAASASLLLPLQNPETSVVNNNLLTKLQLQETLLHLIQDSLPLSPASLY
CWHRPSPYFFKLDDQVKIRF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagctgctggtggcctagtgggcaagggacgggacatcagtttggcggcc
ctgcagcgccacgacccctatatcaaccgcatagtggacgtggctagccaggtggccctg
tacactttcggccatcgggccaacgagtgggagaagactgatgtagaaggaaccctgttt
gtttatacaaggtcagcttctcccaagcatggattcaccattatgaataggctcagcatg
gaaaacaggactgaacccatcactaaagacctggatttccaacttcaggatccttttctt
ctatataggaatgccagattgtccatttatggaatttggttttatgataaggaagaatgc
caaagaattgcagagctcatgaaaagcctgactcaatatgagcaactgaaagcacgtcag
ggggctagagcaggaatctccccaatgatcctcaattcaggagagggcaaggaagttgat
atcttacgaatgctcaccaaggccaaagatgaatataccaagtgtaaaacctgttctgag
ccaaagcagataaccagttcatctgccatctacgacaaccccaatctgataaagccaatt
ccagtgaagcctggtgaaggccaacaccagcgtgtccctcaacaaggccagaacttagat
cctgaaccacaacacttatccttgaccacactctttggaaaaccagataaagctgcttat
caggaagttacagaacagaaatcacaactgctaccaccagcaccacagcagcaacaagag
aaacctcccatcagacaaagggttgtacgttcactttcctatgaagaacccaaaagaaat
tcaccaactccagagaagcagctttgtccagccattcagaaactcatggtccggggcaca
gatctccatccagtgtcagagctgcctgaaacccggctgtgtgaaaatggcagtgttcac
cctgtaggagaggttttcactggtcttttccagccggtgaccccacatagcattgggaca
tctcacaaagtacaaagtacatctggagctcagggccttttagagaaacttcagggtacc
cctgggtcagtgagcaagttagagtccagtacatcagtgcctactagttcaactgcacaa
attttcagtgggaattctactcctgctgcccctgcagcacagataaagagtatgggccag
ccacagctggtatacttcaatggctctcttccatctcagactttggggcctcagactctt
agaaaagaagagtctaaagtttcaaggcaaaccctccctatctctggcaaccaaacaagc
agttctggagtgatctctcctcaagagttgctgaaaaagctgcagattgtacagcaggag
cagcagctgcatgcatctaacagacctgccttagccgccaagtttcctgtagttacccag
aatgctaggactctgaaacccttggaagcctggattgacaagacatctagtacagaaaaa
cagacccctctttttcaggtcatctcacctcaacgcattcctgctactgtggctccttcc
ctgctgatgtcccctatggtgttctctcagcctacaccttcctcgcccaaggttggtgag
agtgggttgttgccactaggaagcaaagaacccagtgcggcttctgccagccttcttctg
cctctccagaacccggagacttctgtggttaacaacaacttactgaccaagctgcagctt
caggagacacttctgcacctcatccaggactctctgcccctttcccctgcctccctctac
tgttggcaccgcccctctccttatttctttaaattggatgatcaagtgaaaattaggttt
tga
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