Plasmodium cynomolgi: PCYB_093040
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Entry
PCYB_093040 CDS
T02490
Name
(RefSeq) LSM domain containing protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_093040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_093040
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCYB_093040
mRNA degradation factors
5'-3' decay
Lsm complex
PCYB_093040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
14692873
NCBI-ProteinID:
XP_004222466
UniProt:
K6UTC8
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All DBs
Position
9:complement(917030..917854)
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AA seq
149 aa
AA seq
DB search
MEQPSMPLWLSTFEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNY
FSDVYVGNLIIRGDNIAYFGSVDEDKYAKMFDYSKQNKEGNEAGDTSEADLPKSQGPLTS
ENVVLQYKPINQILSYLPESNQDFSVFEN
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccatccatgcctctatggctcagcacattcgaggaggacattgacacgtac
atcttcatatcctcaagggataacaaactttatctaggaatactgagaacgtacgatcaa
catggaaacatatttttaacgcactgtgtcgagaaaataattgtccctgacaggaactac
ttttcggacgtctacgttggaaacctcatcataaggggagataacatcgcctacttcggt
tctgtagacgaggacaagtatgcaaagatgttcgactactcgaaacaaaataaggaagga
aatgaagcgggggatacctcagaagcggacttacccaagagccaagggcccctaacctcc
gaaaatgttgttctacagtacaaaccaataaatcaaattttgagttacctgccagaaagt
aatcaggacttttccgtttttgagaattaa
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