KEGG   Plasmodium cynomolgi: PCYB_093040
Entry
PCYB_093040       CDS       T02490                                 
Name
(RefSeq) LSM domain containing protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PCYB_093040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcy03019]
    PCYB_093040
Messenger RNA biogenesis [BR:pcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PCYB_093040
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PCYB_093040
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 14692873
NCBI-ProteinID: XP_004222466
UniProt: K6UTC8
LinkDB
Position
9:complement(917030..917854)
AA seq 149 aa
MEQPSMPLWLSTFEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNY
FSDVYVGNLIIRGDNIAYFGSVDEDKYAKMFDYSKQNKEGNEAGDTSEADLPKSQGPLTS
ENVVLQYKPINQILSYLPESNQDFSVFEN
NT seq 450 nt   +upstreamnt  +downstreamnt
atggaacagccatccatgcctctatggctcagcacattcgaggaggacattgacacgtac
atcttcatatcctcaagggataacaaactttatctaggaatactgagaacgtacgatcaa
catggaaacatatttttaacgcactgtgtcgagaaaataattgtccctgacaggaactac
ttttcggacgtctacgttggaaacctcatcataaggggagataacatcgcctacttcggt
tctgtagacgaggacaagtatgcaaagatgttcgactactcgaaacaaaataaggaagga
aatgaagcgggggatacctcagaagcggacttacccaagagccaagggcccctaacctcc
gaaaatgttgttctacagtacaaaccaataaatcaaattttgagttacctgccagaaagt
aatcaggacttttccgtttttgagaattaa

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