KEGG   Plasmodium cynomolgi: PCYB_103290
Entry
PCYB_103290       CDS       T02490                                 
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_103290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcy03041]
    PCYB_103290
Enzymes [BR:pcy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     PCYB_103290
Spliceosome [BR:pcy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PCYB_103290
 Complex B
    PCYB_103290
SSDB
Motif
Pfam: DEAD Helicase_C TFIIA
Other DBs
NCBI-GeneID: 14693339
NCBI-ProteinID: XP_004222926
UniProt: K6UUC6
LinkDB
Position
10:complement(1041680..1046292)
AA seq 1410 aa
MSDYYERYRKDRNSSISSSSKRKRSDSRYDNYGRKKEYHEEGIYKRARPLEDDEEEEEAS
FGRDMQCYRERRREQWGDRIRRDRERDRERDREREKYYQRGYERGYERERERERERERDR
RRDRSPEERPKKTKRKEYLSHSSDGEEEEEEEHTDGRNGRGRHRVSGGRHPEDAAARRVQ
RERDRYEAKESRGERRRTRKRSSSDDRSDEGRGDETATKRDREDENKLSRLERLKQFAER
IKKTGSDEVSPKAGAKATKFTLNTTISSAGRKFHLDVFEGGRQDEDDVEEQQQQERKKKE
KWKWQMKKEEELKSGELKSGELRAGKTKKDSATRGGPGRGGLLSNSPNRRDGGEEPAEES
PAGDDNEDPLEVFMRNLERNCAGAEGEAVGPSKAITLEEIYSYDENRHRFEGAKPPGGEP
PGAAVHSGEVAEEMHKTAKQPSQSAKQPSQSAKQPSQSAKQPSQSAKQPSQTANQPTQSA
KQPSQTANQPTQSADLQDDQSGEEYHRLFIQALRKKAEEAGEGRGASPPRRTGSNAGSNA
GSNAVRSDGSSEPIDNLSEDSEYNIETNALKKTNKKMLQVNRDQVEYLPIKKNIYVQVSE
ITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILERKNFKKMFGIQMQ
TIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQPPLRNNDGPIAIILTPTRELSKQV
KSEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLN
RVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPTYIQNLAKRLLYKPIEI
IVGEKGKTNNNIYQFVEVVQVKQKVYKLLKILGDWSTYGLILIFVNKQLEADLLYLELFK
YDYKTLVLHGGQDQADREFTLQTFKEGKNKVLIATSVMARGIDIKDIIVVINYECPDHIE
DYIHRVGRTGRSNKIGYAYTFITPEEHAKAYDIYSLIKNNIYYMNKTIDIPRELEELVRE
YTQSSNFAEVRKKGYKGKGFKFTPNEKSRLQMDKANAKKELGLVRDKEGETDNPPGGDAS
DGEVGEGAAGRAAGRAAGRAAEGSVLGGSAPPLGIPQPQQRQPQQRQPQQRQAQQRQAQQ
RQSQQGQPQQRQPQQRQPQQWQPQPPPPPGEPNPQSEIKRIELEIQRIKMNDTMDLSLKA
KQINELMKTYNIMAQQQNAMKKNAEAAQEADIEKMAEQEATKATEHIKDETERKQLFNKV
KQDVKKKLIDSKLQSNSRTENIHRNMLLNSMRIRNMKKYSPFIPHTYVMEDNSIMQEFYI
NDYPQHVRLKICNREVLSRISDMSGSRCQIKGQYSNPNQPNKTTFLLDAKPLHIEITASN
YNQVQIAHNEFTSLINQLLQNSNMKGHRKG
NT seq 4233 nt   +upstreamnt  +downstreamnt
atgagtgactactacgagcgttacagaaaggacaggaacagcagcatctccagtagcagc
aagcggaagagaagcgacagtcggtatgataactatggaaggaagaaggagtaccacgag
gaggggatctacaaaagggccaggcctctggaggacgacgaggaggaggaggaagcgagc
tttggcagggatatgcaatgctatagggagcgccggagggagcagtggggcgaccggata
aggcgcgaccgagagcgcgaccgagaacgcgaccgagagcgcgaaaaatattatcaacga
ggttacgaacgaggttacgaacgagagcgcgagcgggagagggagagggagcgcgaccgc
cgcagagacaggtcccccgaggagcgcccaaaaaaaaccaaaaggaaagaatacctctcc
cacagcagcgacggagaggaagaagaagaggaagaacacacggatggcaggaatggcagg
ggtagacaccgagtgagcggcgggaggcacccagaagacgctgctgcaaggagggtgcag
cgcgagagggatagatacgaagcgaaggagagtcgaggggaaaggaggaggacaaggaaa
cgcagcagcagtgatgatagaagcgacgagggaaggggggacgagacggcaaccaagcga
gatcgcgaagacgaaaataagctctccaggttggagagacttaagcagttcgcggagaga
atcaagaaaacgggtagcgacgaggtcagccctaaggctggagcgaaagctaccaagttt
acgcttaacacgacgatcagcagcgccggcaggaagttccatctagacgtgtttgaggga
ggtaggcaagacgaggacgatgtggaggagcagcagcagcaggagaggaagaagaaggaa
aagtggaagtggcagatgaagaaggaggaggagttgaagtcgggggagttgaagtcgggg
gagttgagggcgggaaagacgaagaaggatagcgccacacgtggaggcccggggagaggg
ggtctgctttccaactcgcccaacaggagagacggcggagaagagcccgcggaggaatcg
cctgcgggggacgataatgaggaccccctcgaagtgttcatgcgaaacttggagcgcaac
tgcgcgggggcagagggcgaggcggtgggccccagcaaggccataacgctggaggagata
tacagctatgacgagaaccggcaccggttcgagggggcaaagccgcccgggggagagccc
cccggagcggccgtccactcgggggaagtcgctgaagagatgcacaaaaccgcgaagcag
ccgtcccaatccgcgaagcagccgtcccaatccgcgaagcagccgtcccaatccgcgaag
cagccgtcccaatccgcgaagcagccgtcccaaactgctaaccagccgacccaatccgcg
aagcagccgtcccaaactgctaaccagccgacccaaagcgccgatctgcaagacgaccag
agcggcgaggaataccaccgattgttcatacaagcgctgaggaagaaagccgaggaggca
ggcgagggcagaggggcgtcgcccccccgtcgcacggggagtaacgcagggagtaacgca
ggaagtaatgcagtacgaagcgatgggagcagcgagccaatcgataacctgagtgaagac
agcgaatacaacatcgaaacgaatgcgctgaagaaaacgaacaaaaagatgctccaagta
aaccgggaccaagtggagtacctaccgataaaaaaaaacatttacgtgcaagtaagcgaa
ataacaaatatgaaagaaagcgacgtggacctctttaggaagaataatggaaatataatc
gtgaggggaaagaactgccctcgaccagtacagtacttttatcaatgtggactgccatct
aaaatcctacctattttggagagaaaaaattttaaaaaaatgtttggcatacagatgcag
acgatcccagcgttgatgtgtgggagggacgtgatcgccattgctgagacggggagtgga
aaaactttatcgtatttatttccagtcattagacacgtccttcaccaaccaccccttcga
aataatgatggcccaatcgctatcatacttactcctaccagggagctcagcaagcaggtt
aaaagtgaagctagaccctactgtcaagcggtgaacctccgaatattggcagtctatggg
gggtcaaatattggtacacaactaaatacactgaaaagaggagtggaaattctggtgggt
actccaggtcgtataattgatatactaacaataagtaactgtaaggtgaccaatctgaat
agagtctccttcgtcgttttggatgaagccgatcggttgttagacctcggattcgagtct
caaatacataacatacttaacaactgcagaaaggacaaacaaacagccatgatttcagca
accttccctacgtatattcaaaatctagccaagagattgctttacaagccaatcgaaatt
attgtaggagaaaaaggaaaaacgaacaataacatatatcaatttgttgaggttgtacaa
gtcaaacagaaggtctacaaacttctgaagattcttggagactggtcaacctatggctta
attctcatttttgtaaacaagcagttagaagcagatctactatatttagaactctttaag
tatgattacaaaacgttagttctgcatggaggacaggatcaagctgatagggaattcact
ctacaaacattcaaagaagggaagaataaggtactcattgctacgtcggttatggcaaga
ggtatcgatataaaggatatcatagtggtaattaattatgagtgtcctgatcatatagag
gattacattcatcgtgttggaagaacaggtaggtcgaacaaaattggatatgcttatacg
tttattactcctgaggaacatgctaaggcgtatgatatatacagcctcatcaaaaacaac
atatattacatgaataaaacgattgatattccgagagagttggaagaacttgttcgggag
tatactcaaagtagcaactttgctgaggttagaaagaaagggtacaagggtaaggggttt
aagtttactccgaatgagaagtcccgacttcagatggataaggccaatgcaaagaaggaa
ctcgggttggtgcgcgataaggagggagagacggacaaccctccggggggagacgcctcc
gatggggaagtgggcgagggggcggcaggcagagcggcaggcagagcggcaggcagagcg
gcagaaggttcggtgctggggggaagtgctcctccacttggaattccccagccgcagcag
aggcagccgcagcagaggcagccgcagcagaggcaggcgcagcagaggcaggcgcagcag
aggcaatcgcagcaggggcagccacaacagaggcagccacaacagaggcagccacaacaa
tggcaaccacaaccaccgcccccgcccggggaacccaacccacaaagcgaaataaaacgc
atcgaactggaaatacagagaataaaaatgaacgacactatggacctgtcgctaaaggcg
aagcagataaacgagctgatgaagacgtacaacatcatggcgcagcaacagaacgccatg
aaaaaaaatgcagaagctgcacaggaagctgacatagagaaaatggccgaacaggaggcc
accaaggcaaccgaacatataaaggatgaaacggaaaggaagcaactctttaacaaagtt
aagcaagacgtgaagaaaaaactaatcgatagcaaactgcagagcaactccaggacggaa
aatattcataggaatatgctcctaaactcgatgaggatacgaaacatgaagaaatactct
cccttcattcctcacacctatgttatggaagacaactccatcatgcaggagttttacatt
aatgactatccgcagcatgtgcgactgaagatatgcaacagggaggtactctctcgcatt
tccgatatgtctggttcaaggtgccagataaagggtcagtactccaaccccaatcagcca
aacaagaccaccttcctgctcgacgccaagccgctacacattgaaatcaccgcgtccaac
tacaaccaggtgcagattgcgcacaacgagttcacgtcgctgatcaatcagttactgcag
aatagcaatatgaaggggcaccgcaaggggtga

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