Pseudomonas chlororaphis PCL1606: PCL1606_29120
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Entry
PCL1606_29120 CDS
T03768
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCL1606_29120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_29120
Enzymes [BR:
pcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PCL1606_29120
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PCL1606_29120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKA24363
UniProt:
A0A0D5XZ53
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All DBs
Position
3165907..3166704
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AA seq
265 aa
AA seq
DB search
MKALKIATFNLNGIRARLPNLLAWLARERPDIVCLQELKAADRDFPAAALEQAGYGSLHL
GQASWNGVAILARGAQPLEIRRALPGTEDDPQSRYLEAAVHGVLVGCLYLPNGNPQPGPK
FAYKLAWFERLIAHAATLCDNGHPVLLAGDYNVVPTDLDIYDPRSWLKDALLQPQSRDCY
RRLLELGWTDALRALYPQERVYTFWDYFRQHWPRNSGLRIDHLLLNRELAPYLKQAGVDA
WVRNEPHASDHAPTWIELGTRRRRR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttgaagattgccaccttcaacctcaacggcatccgtgcgcgcctgccgaac
ctgttggcctggctggcccgcgagcgcccggatatcgtctgcctgcaggagctcaaggcc
gccgaccgggactttcccgcggcggcgctggaacaggccggctacggcagcctgcacctg
ggccaggcgtcgtggaacggcgtcgcgatcctggcccgcggggcccagccgctggagatc
cgccgcgccttgccggggaccgaggacgacccgcagagccgttacctggaggcggcggtc
cacggcgtgctggtggggtgcctgtacctgcccaacggaaacccgcagccggggccgaaa
ttcgcctacaagctggcctggttcgaacgcctgatcgcgcatgccgcgaccctgtgcgac
aacgggcacccggtgctgctggcgggggactacaacgtggtgccgaccgacctggacatc
tatgacccgcgctcctggctcaaggacgcgttgctgcaaccgcaaagccgcgactgctac
cggcgcctgctggagctcggctggaccgacgccttgcgcgcgctgtacccgcaggagcgg
gtctataccttctgggattatttccgccagcactggccccgcaactcgggcctgcgcatc
gatcaccttctgctcaaccgcgagctggcgccttacctgaaacaggccggggtcgatgcc
tgggtgcgcaacgaaccccatgccagcgaccatgcgccgacctggatcgagctgggcacg
cgccggcgtcgccgctga
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