Phoenix dactylifera (date palm): 103706712
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Entry
103706712 CDS
T03274
Name
(RefSeq) transcription factor bHLH140 isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103706712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103706712
Enzymes [BR:
pda01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
103706712
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
103706712
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
103706712
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103706712
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103706712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
AAA_18
AAA
AAA_19
nSTAND3
AAA_22
AAA_16
AAA_17
ATP_bind_1
CPT
AAA_25
NACHT
Zeta_toxin
AAA_30
DM
NTPase_1
RuvB_N
Motif
Other DBs
NCBI-GeneID:
103706712
NCBI-ProteinID:
XP_008789139
UniProt:
A0A8B7C0F1
LinkDB
All DBs
Position
13:complement(9766568..9772054)
Genome browser
AA seq
779 aa
AA seq
DB search
MFTFSPFRLLSEEQEEVKGKRKTLVVILMGPPGSGKTTFCNDVMSSARRCWVRICQDTIA
NGKAGAKSQCLKSAADALKDGKSVFIDRCNLERDQRADFLRLGGAQADVHAVVLDLPARL
CISRSVNRTGHEGNLQGGKAAAVVNRMLQKKELPQLSEGFSRITFCQNENDVKNAVKIYS
ALDLSDTLPSGVFGQRSKDAKVQLGIMKFLKKVEIPENETSGKCNVIDDNTCQDSIPRQE
TCGKDLCSMELEMENKDKKGSDSLEKSSVGDLSSNDVHTLAFPSISTADFQFDHEKASDI
IVESVADFLRKVDNVRLVLVDLSHKSNILSLVRAKAAERNIDSKKFFTFVGDITQLYTKR
GLRCNVIANAANWRLKPGGGGVNAAIFKAAGKSLEIATKERIETLSPGNSVAVPLPSTSP
LYKFEGVTHVIHVLGPNMNPQRPNYLKNNYVKGCMVLRDAYSSLFEHFASISKSCLQREG
SGDSRYNLSDPQSNLMEGTTSEQFPQSDQKIKREDPYDFERNKRSKGILTESSSKDKYNM
QHGDHGFAESGINSDAPKSDDESRKTAVATKRTWGSWAQALYENAMHPEKHKNAVMEISN
EYVVLNDRYPKAKKHILVLSRLHGLDCLADVQKEHLPLMKQLHAVGVQWAERFLSEDASL
VFRLGYHSVPSMRQLHLHVISQDFDSTHLKNKKHWNSFNTAFFRDSTDAIEEIDKYGAAK
INDEKLLTMELRCHRCRSAHPNIPKLKSHVANCKFSFPSHLLHNGRLVSASSKTVSEKP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtttacattttctcctttccgtttgctttcagaagaacaagaagaagtgaaggggaaa
aggaaaaccttggtggtgattctgatgggtcccccaggcagcggcaagaccaccttctgc
aacgacgtcatgagctccgcccgccgttgctgggttcggatttgccaggatactattgca
aatggaaaagctggagcaaaatcacagtgcttaaagagtgcagctgatgcactgaaggat
ggtaaaagtgttttcattgatagatgcaacttggagcgagaccagcgtgctgattttctg
aggcttggaggagcacaagcagatgtacatgcagtggtccttgatctgcctgctcggctt
tgtatttcccggtcagtgaaccggacagggcatgaagggaacttgcaaggaggaaaagct
gctgctgtcgttaatcgcatgctacaaaagaaagaactaccccagctgagtgagggattc
tctcggattacattttgtcagaacgaaaatgatgttaaaaatgctgtcaaaatatacagt
gcactggatctgtctgatacccttccatctggagtgtttggccagaggagtaaggatgca
aaagtccagcttgggataatgaaatttctgaagaaagtagaaataccagagaatgaaaca
tcaggcaaatgtaacgtgatagatgacaatacttgtcaagattctattccaagacaagaa
acttgtggaaaagatctgtgctccatggaacttgaaatggaaaataaggataagaaaggg
agtgactctttggagaaatcttctgttggtgatctttcctcgaatgatgttcatacacta
gctttcccatccatttcaacagcagattttcaatttgaccatgagaaggcatctgacatt
atagtagagagcgttgctgattttttgagaaaggttgataatgtcagacttgttctggtc
gacctgagtcacaaatcaaatatcttatctttggttagggctaaggctgcagagagaaac
attgactctaaaaaattctttacatttgttggagatattactcagctgtacacaaaaaga
ggcctacgttgtaatgtcattgccaatgctgccaactggcggttaaaacctggaggtgga
ggggtcaatgcagctatattcaaagcagcaggcaaatcactagaaattgcaaccaaggaa
cgaatcgaaactcttagcccagggaactctgttgcagtccctcttccctcaacttctccc
ctgtataaattcgaaggagtgacccatgtcatacatgttcttggaccaaatatgaatcca
cagagaccaaactatcttaaaaataactatgtcaaaggatgcatggttcttcgtgatgcg
tactcatcactttttgagcactttgcatctatctcaaaaagctgtcttcagagggaaggc
agtggagattctagatataatctttcagatccacaaagcaatctcatggaaggaactacc
agtgagcagtttccacagagtgatcagaagatcaaacgagaggacccttatgattttgag
agaaacaaaagatccaaaggaattctaactgaatcaagttcaaaggacaaatataatatg
cagcatggcgatcatggatttgctgaatctggaatcaattctgatgcgccaaaatccgat
gatgagagcagaaagaccgctgttgctacgaaaagaacatggggttcttgggcccaagct
ctttatgagaatgccatgcatcctgagaagcacaagaatgctgtcatggagatatcaaat
gaatatgttgttttgaatgatcggtatcccaaggcaaaaaagcatattctggtgctttcg
agattgcatggtctcgactgtcttgcagatgtccagaaagaacaccttcctttgatgaaa
caattgcatgctgtgggagtgcagtgggctgaaagatttttaagcgaagatgcttcttta
gtatttagacttggatatcattcagtcccatcaatgaggcaactgcaccttcatgttata
agccaggattttgactcgacgcacttgaagaacaaaaaacactggaactcttttaacacc
gcttttttccgtgattctactgatgcaatagaggagattgataagtatggagcagcaaag
atcaatgatgagaagttgctgacaatggagttacgctgccacagatgtcggagtgcacat
cctaatatcccaaagcttaaatcccatgttgctaattgcaaattttcctttccctctcat
cttctccacaatggccgacttgtgtcggcttcatcaaaaactgtaagtgaaaaaccatga
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