Phoenix dactylifera (date palm): 103706809
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Entry
103706809 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP155-like isoform X2
KO
K14312
nuclear pore complex protein Nup155
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103706809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103706809
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103706809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CAP_N-CM
Motif
Other DBs
NCBI-GeneID:
103706809
NCBI-ProteinID:
XP_008789279
UniProt:
A0A8B7C0U2
LinkDB
All DBs
Position
11:complement(7602425..7633256)
Genome browser
AA seq
1487 aa
AA seq
DB search
MAWEDEIVGLDVASAGVVVSERIEKEAAGQVDLREALEASKLATHPYSSHPKEWPPLLEV
AETRELPPVLIERYNAGGGEGTALCGIFPEIRRAWASVDNSLFLWRFDSWDGQCSEYSGE
DHAICAVGLVRPKPGIFVEAIQYLLVLATPVELILVGVFCTGNEDGTDRYAELFLQPLSE
YTIASDGVIMTCITCTDRGRIFLAGRDGHIYEMQYSTGSGWHKCCRKVCLTAGLGSLVSR
WVLSNALKFGSIDPVVDMVVDNERHILYSRTEDMKLQVFDLGANGDGPVKRIAEEKNLVD
PQETQYGSRRSAGSRANTRAAKPSIVCVAPLSIMESRWLHTVAVLSDGTRLYLTTSGGNG
GLTGQNSAHQRPRCLKVLASRPSPPLGVGGGLTFGTMSATSRTQADDLALKVETAFYSAG
TLILSDLSAPALSSLLLVNRDSSMQSLLSGSFGMTAPSPCALREIVSSLPLEGRMLFAAD
VLPMPDTAVAVQSLYSDTEDFSFTGSRESCEKASRKLWARGDLSTQHILPRRRIVVFSTM
GMMEVVFNRPVDILRRLLEINSPRPQIEEFFKRFGAGEAASMCLMIAAKLVYMEENLINN
PVAEKAAEVFEDPRLIGMPQLDGSTGLLNTRTSVEGFSMGQVVQEAEPVFSGAHEGLCLC
SSRLLFPIWELPFMIVRREVGSDARFNEGVIVCRLSVEAMQVLESKIRSLEQFMRSRRNQ
RRGLYGFVAGLGDLTSSIVYSESGANSRSTGRNLLVPHSQNAEPGDAVAPNKRQRLPCSS
AELAAMEVRAIECLRRLLRRSSEALFLLQLISKHHVTRLVQNLDSDLRQELVHMTFHQLV
CSQEGDQLAMQLISRLMKYYIGPDSRGTVDEISMKLQKGCPSYYNESDYKYFLAVDYLEK
AAVATNSEERENLARDAFSLLSKIPQSADLSTVCKRFEDLRFYEAVVRLPLQKAQAVDPK
GDAFNDKIDPGNRDYALAQREQCYNIIINALGSLARKGTQTEFSASVRFSGMGAILDQAS
RDKYIHQVIQLSVRWPDTAFHECLYRTLITLGLENELLEYGGCDLVPFLQNAGRKPTEEV
QVVTAITPMASAMRDLEGPIPSSDTKYLDLLAKYYVLKRQHILAAHILYRLAERQCSDSG
EAPTLEQRHQYLSNAVLQAKRAINNDSLVSSTRKTIDDGLLDMLEAKLTVLQFQMKIKEE
LEAIASRLEDLPSTSGSPPSDPLHTSLVVDRNIAKDAKDKAKELTLELKSITQLYNNYAV
PFNLWEICLEMLNFANYSGDADSKIVREIWARLLDQALSRGGVAEACTVLKRVGSNLYPG
NGACLPLETLCLHLEKAALERLESGVELVGDEDVAGALLAACKGAQEPVLSIYDQLLSNR
AVLPSLTLRLRLLRSVLGILREWTASALAYRMGTTTASASVIFGGTSVLEQTTVTNQRIR
DKITTAANRYMTEVRRLALPQSRTAAVYQGFRELEDKLLSFASLEPY
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggaggacgagatcgtcggattggacgtggcttccgccggcgtcgttgtgagc
gagcgcatcgagaaggaagccgccggccaggtcgacctgcgagaggctctcgaagcttcg
aaactcgccacccatccctactcttcccatcccaaagagtggcctcctctattagaagtt
gcggagactcgggaattacctcctgtgctaattgagagatacaatgctggcggtggtgaa
ggaacagcattatgtggaatttttccagagatacgccgtgcttgggcatcagttgacaat
tctttgtttctctggcgctttgatagctgggatggccagtgctctgaatacagtggtgag
gatcatgcaatttgtgctgtaggacttgtcagaccaaagcctggtatttttgtggaagca
atccaatatcttttagtgcttgcaactcctgttgagctgattcttgtaggagtattttgc
actggaaatgaggatggaacagatcgatatgctgaacttttcttacagcctttatctgaa
tacacaatagcatctgatggtgttatcatgacctgcattacatgtacggatagaggtcga
atttttctagctgggcgcgatggtcacatatatgaaatgcaatattcaactggttcaggc
tggcataagtgttgccgcaaggtttgcctcacagcaggtttgggcagtcttgtttcaaga
tgggtcttgtcaaatgctcttaaatttggatctattgatccagttgtggatatggttgtt
gataatgaaaggcatattttgtattctcgaacagaagatatgaaactacaggtcttcgac
ttgggagcaaatggtgatggtccagttaagagaattgctgaagagaaaaatttggttgat
cctcaagagacacaatatggaagtagaaggtctgcaggatcaagagcaaatacccgggca
gcaaaaccatctatagtttgtgttgctcctttatcgattatggaatcaagatggctgcac
actgttgctgttttatcagatggcacaagattgtaccttactacttctggtgggaatggc
ggtttaacaggacaaaatagtgctcatcaaaggccacgctgcttaaaagttttagcaagt
aggccatcacctcctttaggagttggtggtggactcacttttggcactatgtctgcaact
agtagaactcaggctgatgatcttgctctgaaggtggaaacagctttttattcagctggc
acacttatactttcagatttatcagccccagctttgtcctctcttttgcttgttaacaga
gattcaagcatgcaatcacttctttctggtagctttggaatgactgcaccaagtccttgt
gcattacgtgagatagtatcatccttgcctctggagggtcgaatgctttttgcagctgat
gttttacccatgccagatacagcagtagctgtgcagtcattgtactcagatacagaagac
ttctcttttacaggatctagagaatcatgtgagaaggcatcaaggaaactttgggctaga
ggagacctgtcaactcaacatatcttacctcggaggaggattgttgtattcagtaccatg
ggtatgatggaggtagtttttaacaggcctgtggatattctgagaaggttgttggagatc
aattcaccaagaccacagatagaggaattttttaagcgttttggagctggagaggctgca
tctatgtgtttaatgatagcagccaagttggtttacatggaagaaaatctaataaacaat
ccagttgctgagaaagctgcagaagtatttgaggacccaagactcattggaatgccacaa
cttgatggtagcactggtttgttgaacactagaacttcagttgaaggcttcagcatgggc
caggttgtgcaggaggctgaacctgtgttttctggtgcacatgaaggactttgcttgtgc
tcatctaggctgctctttcccatatgggaactaccttttatgattgtccgtagggaagta
ggctctgatgctcgctttaatgaaggggtgatagtgtgcagactttctgttgaggcaatg
caagtccttgaaagcaaaattcgttcgttagagcagtttatgaggtctagaagaaaccag
agaagggggctatacggttttgttgctggtctaggagatctaaccagttctattgtttac
tcagaatcaggagccaatagtcgaagtacaggcagaaacttattagtaccacactctcaa
aatgctgaaccaggagatgctgtggcaccaaataaaaggcagcgacttccttgcagttct
gctgaactggctgccatggaggtgagagcaattgaatgtcttaggaggttgcttcgaaga
tctagtgaagcattattcctacttcaacttatttcaaagcaccatgttactcgcttggta
caaaatttagatagtgatctacgccaggaacttgttcatatgacattccatcagttggta
tgttctcaggagggagaccagcttgccatgcagcttatttcgagactcatgaagtactac
attggtccagatagccggggcacagtagatgagattagcatgaaactacagaagggttgt
ccaagttactacaatgagtctgactataaatatttcctagcagtagactatcttgagaaa
gctgctgtcgccactaactctgaggagcgagaaaatcttgccagagatgctttcagcctt
ttgagcaaaattccccaatctgcagacttgagcactgtatgcaaacgatttgaagacttg
cgattttatgaagctgtggtacgactgcctctgcaaaaagctcaggctgttgaccctaaa
ggtgatgcattcaatgataaaattgatccaggcaatcgagattatgcacttgcacaacgt
gaacaatgttataacataattataaatgcccttggttctctggcacgaaaagggacgcag
acggagttcagtgcttctgttagattttcgggcatgggggctatacttgaccaggcttca
cgggacaagtacatacaccaagttattcagcttagtgttcgatggcccgacacagccttt
catgagtgtttgtacaggacactaattaccttgggccttgaaaatgagttactggagtat
gggggttgtgatttggttccatttctacagaatgcaggcagaaagccaacagaagaggtt
caagttgtcactgcaataacaccaatggcttctgcaatgcgtgatttggagggacctatt
ccttctagtgacaccaagtatcttgaccttctagcaaaatattatgtcttgaagcggcaa
catattcttgctgcacatatactgtacaggttggcagaaaggcaatgcagtgattcagga
gaagctcctactctagaacagaggcatcaatatctcagcaatgcagttttacaggctaaa
agggcaattaacaatgatagtttagtaagttcaaccagaaagactattgatgatggattg
ctagatatgcttgaagcaaagcttactgttcttcaattccaaatgaaaattaaagaagaa
cttgaggcaatagcatcaaggttagaagatttgccaagcaccagtggatcccctcctagt
gatcctttacatactagcctggtggttgaccgtaatattgcgaaggatgccaaagacaag
gcaaaagagttaacgctagaattaaagagcatcactcaattatacaataactatgctgtt
ccctttaacctttgggagatatgcctggaaatgcttaactttgcaaactattctggagat
gctgacagtaaaattgttagagagatctgggctagacttcttgatcaagctctttcaaga
ggaggtgttgctgaagcctgcaccgtgttgaagagggttgggtcgaatctttatcctgga
aatggggcttgcttgcctttagagacactatgtcttcatcttgagaaggctgctctggag
cggttagaatcaggagttgaacttgtgggtgatgaggatgttgcgggagcccttcttgca
gcctgtaaaggtgcacaagagcctgtattaagcatctatgatcaattgctgtcaaacaga
gctgttttgccttcactaactctgagactgcggcttctccgatcggttcttgggatcctt
cgtgagtggactgcatctgcacttgcttatagaatgggtactacaacagccagtgcttcc
gttatatttggtggaacatcagtgttagagcagacaacagtaacaaatcaaagaattcgg
gacaaaatcactacagcagcaaacaggtacatgaccgaagtgcggaggttggcccttcca
caaagtcggactgcggctgtctaccaaggttttcgagaattggaagacaaactgctgtct
tttgcttccttggaaccatactga
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